Cytobacillus spongiae: LS684_23745
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Entry
LS684_23745 CDS
T09119
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cspg
Cytobacillus spongiae
Pathway
cspg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LS684_23745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspg03400
]
LS684_23745
DNA repair and recombination proteins [BR:
cspg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LS684_23745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Prok-RING_4
Motif
Other DBs
NCBI-ProteinID:
UII58603
LinkDB
All DBs
Position
unnamed:complement(628277..629104)
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AA seq
275 aa
AA seq
DB search
MHTIWKGSISFGLVNIPIKLHSATEDRDIKLRSLHKECHTPIKYEKVCPACEKEIDHHDI
VKGYEVTKGKFVVLQEEELKELKEENGDKAVEIVDFIKMEEIDPIFFERTYYVSPNDGGK
KAYSLLRKALQESGKVGIAKITMRSKEQLSIVRVYENTLVMETIHYPDEVRGTGDVPNVP
EEDEITDKELETATMLIEQLTTDFQPQKYKDLYRERLSQLIESKQTGEKIVTAKEKEPKE
NVTDLMAALQASIDSSKPNKAKTTKKKATSKKKAQ
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatttggaaaggctctattagtttcggcttggtgaacatccccatcaaactt
cattcggccactgaagatcgggatattaagctccgatcacttcataaagaatgccataca
ccgattaaatatgagaaagtgtgtcctgcatgtgaaaaagaaatagaccatcatgacatc
gtgaaaggatatgaagtgaccaaaggtaaatttgtcgtacttcaagaagaggaattaaag
gaactgaaggaagagaacggtgacaaagcagtagagattgtagacttcataaaaatggaa
gaaatcgatccgattttctttgaacggacttattatgtttcaccaaatgatggtgggaag
aaagcctattccttgttaagaaaggctcttcaggaatctgggaaggtagggattgccaaa
atcaccatgaggtcgaaggaacagttatcgattgtcagagtgtatgaaaataccctcgta
atggagaccattcactatccagatgaagtcagaggcacaggggatgttccaaacgtccct
gaagaagatgagataacagataaagaactcgaaacagctacgatgttaattgaacaactg
actacggattttcaaccacagaaatataaagacctgtatcgtgaacgcttaagtcaatta
atcgaatctaagcagaccggggaaaagatcgtcacagccaaagaaaaagagcctaaagag
aatgtgacagacttaatggccgcacttcaagcttcgattgattcgtcaaagcccaataag
gccaagaccacgaaaaagaaagcgacttcaaagaaaaaagcccaatag
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