Corynebacterium sphenisci: CSPHI_01785
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Entry
CSPHI_01785 CDS
T05122
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csph
Corynebacterium sphenisci
Pathway
csph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSPHI_01785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csph03021
]
CSPHI_01785
03400 DNA repair and recombination proteins [BR:
csph03400
]
CSPHI_01785
Enzymes [BR:
csph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSPHI_01785
Transcription machinery [BR:
csph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSPHI_01785
DNA repair and recombination proteins [BR:
csph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSPHI_01785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
APT90022
UniProt:
A0A1L7CW54
LinkDB
All DBs
Position
386078..387088
Genome browser
AA seq
336 aa
AA seq
DB search
MLISQRPVLTEDYIDSSRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIEGVL
HEFTTITGVKEDVSDIILNIKGLVLSSDFDEPATVYLRREGAGAVTAADIECPAGVEIHN
PDHHLATLNEQGRLEIEMVVERGRGYVPADVRSDEIGRIPVDQIYSPVLKVSYKVEATRV
SQRTDFDKLIIDVETKNSITARDAMASAGKTLVELFGLARELNDQAEGIEIGPNPLEAED
VAAFSTPIEDLEFSMRSYNCLKREQIDTVGQLAAKTESDLLDIRNFGDKSITEVKEKLAE
LGLSLKDSPDSFDPAAAAEFTEGPEWSAAEDEGYAE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcccaacgcccggtcctcaccgaggactacatcgactcctcgcgctcccgg
ttcatcatcgagccgctggagcccgggttcggctacaccctcggcaactcgctgcggcgc
accctgctgtcgtccatcccgggcgcggcggtgaccagcatccgcatcgagggggtgctg
cacgagttcaccaccatcaccggggtgaaggaggacgtctccgacatcatcctcaacatc
aagggcctggtgctgagctccgacttcgacgagccggccaccgtgtacctgcgccgcgag
ggcgccggcgcggtgaccgccgccgacatcgagtgcccggccggggtggagatccacaac
ccggatcaccacctggccaccctcaacgagcagggccggctggagatcgagatggtcgtc
gagcgcggccgcggctacgtgcccgccgatgtgcgctccgacgagatcggccggatcccg
gtcgaccagatctactccccggtgctgaaggtcagctacaaggtcgaggccacccgcgtg
tcccagcgcaccgacttcgacaagctgatcatcgacgtggagacgaagaactccatcacc
gcccgcgacgccatggcctcggccggcaagaccctggtggagctgttcggcctggcccgg
gagctcaacgaccaggcggagggcatcgagatcggcccgaacccgctggaggcggaggac
gtcgccgcgttctccacccccatcgaggatctggagttctccatgcgctcctacaactgc
ctcaagcgcgagcagatcgacaccgtcggccagctggccgcgaagaccgagtcggatctg
ctggacatccgcaacttcggcgacaagtcgatcaccgaggtcaaggagaagctggccgag
ctgggcctgtccctgaaggattccccggacagcttcgacccggccgccgccgccgagttc
accgagggcccggagtggtccgcggcggaggacgagggctacgccgagtag
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