| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
csph Corynebacterium sphenisci
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csph00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSPHI_03310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csph03019]
CSPHI_03310
03400 DNA repair and recombination proteins [BR:csph03400]
CSPHI_03310
Enzymes [BR:csph01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSPHI_03310
Messenger RNA biogenesis [BR:csph03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSPHI_03310
DNA repair and recombination proteins [BR:csph03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSPHI_03310
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(707155..709338)
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| AA seq |
727 aa
MPREEAEGLLRGLAGDAARLRDDQWRAIDALVNDRGRLLVVQRTGWGKSAVYFIAAKLLR
RRGRGAAVIISPLLALMRNQVDAARAAGIAAETVNSANMTEWAEIHSRIAAGAVDVLLVS
PERLNNPRFRDEVLPELARAAGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLGAGVPVL
ATTATANDRVVEDVRAQLGEGTGVLRGGLDRESLHLSVVRLPDTTARPAWLAERLAELPG
SGIVYCLTVAAAEDLAGALDAAGHPVAAYTGRTDAAERERLEAALLANEVKALVATSALG
MGFDKPDLGFVVHMGAPGSPISYYQQIGRAGRATDRAEVILLPGAEDRDIWAYFASLSFP
PEDTVRALLAALGPEPLSTPRLEALVDLSRNRLEQVLKVLDVDGAVRRVAGGWVATGAEW
SYDAERYAGLARARRAEQEAMLAYEALGPGSGDPAAPDPAACRMLFLRRQLDDPTAAGPC
GRCDNCTGVHRGTGVDAGAAAAVSARLTEPGVRLPARRQWPTGMDRVRGAERGSLGEAGV
PLPPKGRIHGVGQGRALGRLNDIARGPALAELLAQATWRPDPAAWREDPRLRDVVQVLAG
WDWARRPVAVVALAGHGPDAEAPGPALDEMVLAVARAVAAIGRMRFAGTLPLRPGAGEVT
AQNSAYRVGGLIDRWDFAALAGAGLGEGPILLVADVVDTGWSTTVAAAGLSAATGCEVLP
LALAARG |
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| NT seq |
2184 nt +upstreamnt +downstreamnt
gtgccccgcgaggaggccgaggggctgctgcgcggcctcgccggggacgccgcccggctg
cgcgatgaccagtggcgggcgatcgacgccctggtcaacgaccggggccggctgctggtg
gtgcagcgcaccggctggggcaagtccgcggtgtacttcatcgccgcgaagctgctgcgc
cggcggggccggggcgcggcggtgatcatctccccgctgctggccctgatgcgcaaccag
gtcgacgccgcccgggcggcgggcatcgccgcggagaccgtgaacagcgccaacatgacc
gaatgggccgagatccactcccggatcgcggccggggcggtggatgtgctgctggtcagc
ccggagcggctgaacaacccgcgcttccgcgatgaggtgctcccggagctggcccgcgcc
gccgggctggtggtcgtcgacgaggcgcactgcatctccgactggggccacgacttccgg
cccgactaccggcggatccgggatctgctcgcgggcctgggggcgggcgtgccggtgctg
gccaccaccgccaccgccaatgaccgggtggtggaggatgtgcgcgcccagctcggcgag
ggcaccggggtgctgcgcggcggcctggaccgggagtcgctgcacctgtccgtggtgcgg
ctgcccgacaccaccgcccggccggcctggttggccgagcggctggccgagctgcccggc
tcggggatcgtgtactgcctcaccgtcgccgccgccgaggatctcgccggggccctggac
gccgcggggcatccggtggcggcctacaccgggcgcaccgacgccgcggagcgggagcgc
ctggaggcggcgctgctggccaacgaggtcaaggcgctggtggcgacctcggcgctgggc
atgggcttcgacaaaccggatctggggttcgtggtgcacatgggcgcgccggggtcgccg
atctcctactaccagcagatcggccgcgccggccgggccaccgaccgggccgaggtgatc
ctgctgcccggggcggaggaccgggacatctgggcctacttcgcctccctgtccttcccc
ccggaggacacggtgcgcgccctgctcgccgccctgggcccggagccgctgtccaccccg
cgcctggaggcgctggtggatctctcccgcaaccgcctggagcaggtgctgaaggtgctc
gacgtggacggggcggtgcgccgggtcgccggcggctgggtggccaccggcgcggagtgg
tcctatgacgcggagcgctacgcgggcctggcccgggcgcgccgcgccgagcaggaggcg
atgctcgcctacgaggccctgggccccggctccggggatccggccgcgccggacccggcg
gcgtgccggatgctcttcctgcgccgccagctcgacgaccccaccgcggccggcccctgc
gggcgctgcgacaactgcaccggggtgcaccggggcaccggggtggatgccggcgccgcc
gccgcggtgtccgcccggctcaccgaacccggggtgcggttgcccgcccgccggcagtgg
cccaccggcatggaccgggtgcgcggggcggagcgcggcagcctcggcgaggccggggtg
ccgctgccgccgaagggtcggatccacggggtcggccagggccgggcgctgggccggctc
aacgacatcgcccgcggccccgcgctggcggagctgctggcgcaggccacctggcggccg
gatccggcggcctggcgcgaggatccccggctgcgcgacgtggtgcaggtgctcgccggc
tgggactgggcgcggcgcccggtggcggtggtggcgctggccggccacggccccgacgcg
gaggcccccggcccggccctggacgagatggtcctcgcggtggcgcgggcggtggccgcg
atcggccggatgcgcttcgccgggacgctgccgctgcgccccggcgccggcgaggtcacc
gcgcagaactccgcctaccgggtcggcgggctcatcgaccgctgggatttcgccgccctg
gccggcgcgggcctcggcgaggggccgatcctgctggtcgccgatgtggtggacaccggc
tggtcgacgaccgtggccgccgccgggctgtccgccgccaccgggtgcgaggtgctgccg
ctggcgctggccgcccgcggctga |
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