Corynebacterium sphenisci: CSPHI_05145
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Entry
CSPHI_05145 CDS
T05122
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csph
Corynebacterium sphenisci
Pathway
csph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSPHI_05145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csph03400
]
CSPHI_05145
Enzymes [BR:
csph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CSPHI_05145
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CSPHI_05145
DNA repair and recombination proteins [BR:
csph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSPHI_05145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Auto_anti-p27
Zn_ribbon_ACC
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
APT90522
UniProt:
A0A1L7CXJ7
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All DBs
Position
1080650..1081510
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AA seq
286 aa
AA seq
DB search
MPELPEVETIRRGLAPHLAGRRIESAAVLRDRAARRQPGGAAELAARVTGRRVTAVDRRG
KYLWWVLDDGATLLVHLGMSGQLTLPAAEAGPDRHLRAAFTLDDGTVVAFRDQRTFGWLW
ACDLAPSRHDGRPVPAPAAHIAPDLLEVTDRARGPAELAHRIRARRSGVKRVLLNQEVVS
GIGNIYADEMLWAARLDGEVPADELGVRRLAGLIRAGRAVMERSLAAGGTSFDSLYVHVN
GESGYFSRELAVYGRAGSDCPRCGATVVRRRFMNRSSYLCPRCQRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtggagaccatccgccggggcctggccccgcacctggccggc
cggcggatcgagtccgcggcggtgctgcgggatcgggcggcgcgccgccagcccggcggg
gccgccgagctcgccgcccgggtcaccggccggcgggtcacggcggtggaccgccgcggc
aagtacctgtggtgggtcctcgacgacggcgccacgctgctggtgcacctggggatgagc
ggccagctcaccctgcccgccgccgaggccggcccggaccggcatctgcgggcggcgttc
accctcgacgacggcaccgtggtggccttccgggaccagcgcaccttcggctggctgtgg
gcctgcgacctggcgccctcccgccacgacggccggccggtgcccgccccggcggcgcat
atcgccccggatctgctggaggtcaccgaccgggcccggggcccggcggagctggcgcac
cggatccgcgcccggcgcagcggggtgaagcgggtgctgctcaaccaggaggtggtcagc
ggcatcggcaacatctacgccgacgagatgctctgggcggcccggctggacggggaggtg
cccgccgatgagctgggggtgcgccggctggccgggctgatccgcgccggccgggcggtg
atggagcgctccctggccgccgggggcaccagcttcgactccctctacgtgcacgtcaac
ggcgaatccggctacttctcccgggagctggcggtctacggccgcgccggatcggactgc
ccccgctgcggggcgacggtggtgcgccggcggttcatgaaccggtccagctacctctgc
ccgcgctgccagcgcaggtga
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integrated database retrieval system