Crateriforma spongiae: ACLV6H_04015
Help
Entry
ACLV6H_04015 CDS
T11503
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
cspn Crateriforma spongiae
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cspn03000
]
ACLV6H_04015
Transcription factors [BR:
cspn03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ACLV6H_04015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
HTH_22
LacI
HTH_11
HTH_40
HTH_36
TetR_C_24
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
XNP82182
LinkDB
All DBs
Position
complement(888984..889619)
Genome browser
AA seq
211 aa
AA seq
DB search
MASRKMGREMAEKLTDRKRRSVVEAAVKEFQRRGFDNTSMDQIAATAGVSKRTVYNHFAG
KEDLFAVIIERIAELADVIPEFEFESKKSAESQLRAIGDNIFAAIGEPEFQDLARVVLSR
LINAPHASGALEETTNAITMQVTQWFADAKNAGMLNVPRPKVASSQFIGMLMEYEFWPRL
IGVTKQVHQVSPKTYVRDCARVIVNAYAPKP
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcgaaagatggggcgggaaatggcggaaaagcttaccgatcgaaagcggcga
tcggtcgtggaagctgcggtgaaggagtttcagcggcgggggttcgacaacaccagcatg
gaccagatcgccgccaccgccggggtgtccaagaggacggtgtacaaccatttcgccggc
aaagaagatttgttcgcggtcatcatcgagcgaatcgccgagcttgccgatgtgattccc
gagtttgagttcgagtcaaagaagtcggccgaatcgcaattgcgggccatcggcgacaac
atctttgccgcgatcggggaacccgaatttcaagatctggcgcgggtggtgctatcccgg
ctgatcaacgccccgcacgccagcggcgcgttggaggaaacgaccaacgcgatcacgatg
caggtgacgcagtggttcgccgatgcaaagaacgcggggatgttgaacgtcccgcgtccg
aaagtggccagttcgcagttcatcggaatgctgatggaatacgaattctggccacggctg
atcggcgtcaccaaacaggtgcatcaagtcagtccgaagacgtatgttcgggactgcgcg
cgagtgatcgtcaatgcctacgcgccgaaaccgtaa
DBGET
integrated database retrieval system
