Crateriforma spongiae: ACLV6H_12400
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Entry
ACLV6H_12400 CDS
T11503
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cspn Crateriforma spongiae
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cspn03019
]
ACLV6H_12400
Messenger RNA biogenesis [BR:
cspn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACLV6H_12400
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
XNP83779
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All DBs
Position
complement(3165978..3166946)
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AA seq
322 aa
AA seq
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MTSTAPRIAINQLADGQTVAQAFRVADKQIRVNRQGGKYLFLRLADRTGKIVGMMWNVDE
RVADSFDRADYIHTEGRTQVHNGALQVIVTRLERMDPSEVDPADFEQFDAEQSQRLMARL
TEQLGSIEDPQLSRLAQCYLNDGDLMNQLASAAAAVVHHHAFPGGLLRHTVDLMELADFV
GNRYESIDRDLLLMGAFLHDLGKMHELSSDGELSYTDRGQMVGHIVIGIQMLGDKIQQID
TPETPFPVDLRYQLEHLIVSHHGEFEYGSPRLPSTMEAVALHHIDNLDAKISSFASVIEQ
DVSADPRWTNYNPSIGRKLWKK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcgaccgccccccgcatcgcgatcaatcaattggccgacggccaaacggtggcc
caggcatttcgtgtcgccgacaagcaaatccgagtcaaccgccagggcggcaagtatctg
ttcctgcgtctggccgatcgaacgggcaagatcgtgggcatgatgtggaacgtcgacgag
agagtggctgattcgttcgaccgggccgactacatccacaccgaaggacgaacgcaagtc
cacaacggtgcgctgcaagtcatcgtcacacggttggaacgcatggatccgtcggaggtc
gacccggcagatttcgagcaattcgacgccgaacagtcccagcgtttgatggctaggctg
accgaacagttgggttcgatcgaagaccctcaactgtcacgattggcccagtgctatctg
aacgacggtgatctgatgaaccaattggcatccgccgctgcggcggtcgtacaccatcac
gcgttccccggcgggttgctgcgtcacacggtcgacctgatggaactggccgacttcgtt
ggcaatcgatacgaatcaatcgatcgcgacctgttgttgatgggtgctttcctgcacgac
ttgggaaagatgcacgaactgtccagcgacggcgagttgtcatacaccgatcgtggccaa
atggtcggccacatcgtgatcgggatccaaatgctgggtgacaaaattcaacaaatcgat
acaccggagacaccgttcccggtggacttgcgatatcaattggaacatctgatcgtcagc
catcacggcgaattcgaatacggcagcccacgcttgccgtcgacgatggaagcggtagcg
ttgcatcacattgacaacctggacgccaagatcagcagctttgccagcgtgatcgaacaa
gacgtttcggccgacccacgctggaccaattacaacccgtcgatcggacgaaaattgtgg
aagaagtga
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