Crateriforma spongiae: ACLV6H_12625
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Entry
ACLV6H_12625 CDS
T11503
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cspn Crateriforma spongiae
Pathway
cspn03030
DNA replication
cspn03430
Mismatch repair
cspn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACLV6H_12625 (holA)
03430 Mismatch repair
ACLV6H_12625 (holA)
03440 Homologous recombination
ACLV6H_12625 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspn03032
]
ACLV6H_12625 (holA)
03400 DNA repair and recombination proteins [BR:
cspn03400
]
ACLV6H_12625 (holA)
Enzymes [BR:
cspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACLV6H_12625 (holA)
DNA replication proteins [BR:
cspn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACLV6H_12625 (holA)
DNA repair and recombination proteins [BR:
cspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACLV6H_12625 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
XNP83817
LinkDB
All DBs
Position
3227850..3228899
Genome browser
AA seq
349 aa
AA seq
DB search
MPVRHAFEWLPENESSGGEQELPDVVVVSGGDATLRSWVIGGLSREGDRTQFDGEVVRWN
DLRDDLQTASLFDMGEKRTIVVRDADKFLSAHRGELEAYVARPSSANRFVLELGSLASNT
RIYKAVVKDHLLVACSSSPDKKLGVTAAGRRKFLTGYIARRHGCKLAAGAADRLIEMLGE
EIGMLETEIAKLAVYQNPGDTIDEALVEKIVAGWQGQTIWQITDAIAAGDAAEALRQLDK
LISGGQRPIALLPQIAWWLRRLGMATSVVLHREKEGRVWRLEDAIAAAGIHRPGDIQRAK
KQLKSLGRERANRLLPWLLDADLRLKGTHSQEGRDRMLLEQFVLRLAKI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttcggcacgcatttgaatggttacccgagaacgaatcatccggtggcgaacaa
gagcttcctgacgtcgtcgtcgtctcgggcggcgacgcgacgttgcggtcgtgggtgatc
ggtggattgtcgcgtgaaggagatcgcacgcaatttgacggcgaggtggtgcgatggaat
gacttgcgagacgatctgcagaccgcatcgttgttcgacatgggcgaaaagcgaacgatc
gtggtccgtgacgccgataagtttttgtccgcacaccgtggcgaactggaggcgtatgtc
gcgcggccgtcgtctgcgaatcgtttcgtcctggaactgggatcgcttgccagcaacacg
cggatttataaggcggtggtgaaggatcatctgttggtcgcctgttccagttcgcccgac
aagaaactgggggtgaccgctgcggggcgtcgcaagtttctgaccggttacatcgcgcgt
cgacacgggtgcaagttggccgccggagcggcggatcgactgatcgaaatgttgggcgaa
gaaatcggcatgctggaaaccgagatcgcgaagctggcggtctatcagaatcctggcgac
acgatcgatgaagcgttggttgaaaagattgtggccggctggcagggccaaaccatctgg
caaatcaccgatgccattgcggctggggatgcggccgaagcgttacgccaactggacaag
ttgatcagtggcggacaacgaccgatcgcattgttgccccagatcgcatggtggctgcgg
cggttgggcatggcgacatcggtggtgttgcatcgcgaaaaggaaggccgcgtgtggcgg
ttggaagacgcaattgcggcggcggggattcatcgaccgggtgacatccaacgtgccaag
aagcaactgaagtcgttaggccgtgaacgagccaatcggttgctgccttggctattggac
gccgacctgcgtttgaaggggacccacagccaagaaggtcgtgaccgaatgttgttggaa
cagtttgttctgcgactggccaagatctga
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