Crateriforma spongiae: ACLV6H_12685
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Entry
ACLV6H_12685 CDS
T11503
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cspn Crateriforma spongiae
Pathway
cspn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACLV6H_12685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspn03400
]
ACLV6H_12685
Enzymes [BR:
cspn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACLV6H_12685
DNA repair and recombination proteins [BR:
cspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACLV6H_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
XNP83829
LinkDB
All DBs
Position
complement(3243583..3245052)
Genome browser
AA seq
489 aa
AA seq
DB search
MTASEELMSVGATHFDDWRNTARRLVTIGAHPSTVRWIDQRGDDASMQKDLFENVAGAEG
GLSLPASDAPESPPSLRVPGKFIQWAKTIASHSAPGRWELLYRLLWRMTGGERHLLQIAS
DPDVRRAAQMHSAVRRDAHKTKAFVRFRKTVDQIGELFVAWHRPDHYSLDLTADFFARRF
DVMRWTIMTPRQSVYWDGQTIHFGDGSPRSDAPDHDQLEELWKTYYAHIFNPARIKLDAM
RAEMPKKHWPTMPETSLIDDMLRDAPQRVRQMVRHQEGGPTAKSFLPTSDRTLASLCNAA
MACEGCDIHRDASRVVFGRGPADAKLVIVGEQPGDMEDRSGEPFIGPAGQLLRRTMAEVG
LDATQVYITNAVKHFKFKLQGKRRLHVKPSSREIAACRPWLEAELDAIRPAMILCLGATA
ASVIKGPNFRITRQRGEVDKCDHAKWAMATYHPSALLRVPDENARARMMAMFTEDLRRTA
EHHRILNQS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgacggccagcgaagaactgatgtccgtcggcgcgacccattttgacgattggcgaaac
acggctcgcaggctggtcaccatcggagcccatccatcgacggtgcgttggattgaccag
cggggcgatgacgcttcgatgcagaaggacttgttcgaaaacgtggcgggcgccgagggc
ggcttgtcgcttcctgcgtccgacgcccccgagtcgcctccgtcgctacgtgtgccgggg
aagttcatccagtgggcgaaaaccatcgccagccacagcgccccaggacgctgggaattg
ctttaccgattgctttggcgaatgactggtggagagcgacatttgttgcagatcgcttcg
gatccggatgtccgtcgggcggcccaaatgcactccgcggtccggcgtgacgctcataag
accaaagcgttcgttcgttttcgaaaaacagtcgaccagatcggcgaattgttcgtcgcc
tggcatcgtcccgatcactattcgcttgatctcaccgcagacttttttgctcgtcgtttc
gacgtgatgcgttggaccatcatgacgccacgacaatcggtttactgggacggtcaaacg
atccacttcggcgatggatctcctcgcagcgatgcgccggaccatgaccagttggaagag
ttgtggaagacgtattacgcccacatcttcaatccggctcgtatcaagctggatgcgatg
cgggctgaaatgcccaagaagcactggccgacgatgcccgaaacatcattgattgatgac
atgcttcgtgatgcgccgcagcgagtccgacaaatggtgcggcaccaggaaggcggacca
accgcgaaatcgttcttgccaacgtccgatcgaacgctggcatcgttgtgcaacgcggcg
atggcttgtgaaggttgcgatattcatcgggatgcaagtcgcgtggtcttcggacgtggt
ccggccgacgccaaactggtcatcgtcggcgaacagccgggcgacatggaagatcgatcc
ggcgagcctttcatcggcccggccggacagcttttgcgtcgaaccatggccgaagtcgga
ctggacgccacccaggtctacatcaccaatgcggtgaagcatttcaaattcaaattgcag
ggaaaacgacgattgcacgtgaagccgtcatcgcgtgaaatcgccgcatgccggccttgg
ttggaagcggaactggacgcgattcgtcccgccatgattttgtgcctcggcgcaaccgca
gcatcagtcatcaaaggaccgaactttcgcatcacacgccagcgtggcgaagtcgacaaa
tgcgatcacgccaagtgggcgatggcaacgtaccatccgtcagccttgctgagggttcca
gacgaaaacgcccgcgcacgaatgatggccatgttcaccgaagaccttcgccgaaccgcg
gaacaccatcggatattgaatcagtcctga
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