Crateriforma spongiae: ACLV6H_14985
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Entry
ACLV6H_14985 CDS
T11503
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cspn Crateriforma spongiae
Pathway
cspn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACLV6H_14985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cspn03021
]
ACLV6H_14985
03400 DNA repair and recombination proteins [BR:
cspn03400
]
ACLV6H_14985
Enzymes [BR:
cspn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACLV6H_14985
Transcription machinery [BR:
cspn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACLV6H_14985
DNA repair and recombination proteins [BR:
cspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACLV6H_14985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
XNP79179
LinkDB
All DBs
Position
3854861..3855856
Genome browser
AA seq
331 aa
AA seq
DB search
MSMHIRWRGMELPSNVEVDRDTLSATYGKFTAEPFERGFGASVGNSLRRVLLSSLMGSAV
TQIKIRGAQHEFTSIPGVLEDITEIVLNVKSLIVRNHTESTRVITVERSTAGVITGADIE
TDSEVDIINKDHVLATLTEDAPFMMEMVVENGRGYVPSSEHSSIDHEIGIIPIDAVFSPI
TRVRYEVEETRVGQKTNFDKLNLEIWTDGTVSPEMSLIEAAKILRKHLNPFVQYRELGPS
IFSAARGGAGSPEAQLEAKLNMTLADLRLSVRANNCLESENIATVRDLVQRTEDSLLEVR
NFGDTTLNEVREKLAQYGLHLGMRVPSQPLF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcacatccgttggcgtggtatggaattgcccagcaacgtcgaagtcgatcgt
gacaccctgtcggcgacctacggcaaattcactgccgagccgttcgagcgtgggttcggt
gccagcgttggaaatagcctgcgacgggttttgttgagcagcctgatgggcagcgccgtt
acgcagatcaaaatccgtggcgcgcagcacgagttcacgagcattcccggtgtgttggaa
gacatcaccgagatcgttctgaacgtcaaaagcttgatcgtccgcaaccacaccgaatcg
actcgagtcatcacggttgaacgcagcaccgctggtgtgatcaccggtgccgacatcgaa
accgattcggaagtcgacatcatcaacaaagatcacgtgttggcgacgctgaccgaagac
gctccgttcatgatggaaatggtcgtcgaaaatggtcgcggctatgttcccagcagtgaa
cacagcagcatcgatcatgaaatcggcatcattccgattgacgccgtcttcagcccgatc
acccgagtccgctatgaagtggaagaaactcgtgtcggtcaaaagaccaacttcgacaag
ctgaacttggaaatctggaccgacggcacggtttcgcccgaaatgtcgctgatcgaagcg
gcgaaaatcctgcggaaacacctcaacccgttcgtgcagtatcgcgaattgggacccagt
atcttcagcgccgcccgcggcggtgccggatcgcccgaggcccagttggaagccaagctg
aacatgacgctggccgacctgcggctttcggtccgagcgaacaattgcttggaaagcgaa
aacattgcgacggttcgcgacctggttcagcggaccgaagattccctgttggaagtgcgt
aactttggcgacacgactttgaacgaagtccgcgaaaagttggcgcagtacggactgcat
ttgggaatgagggttcccagccaaccgctgttttag
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