Crateriforma spongiae: ACLV6H_17050
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Entry
ACLV6H_17050 CDS
T11503
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K02945
small subunit ribosomal protein S1
Organism
cspn Crateriforma spongiae
Pathway
cspn03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ACLV6H_17050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cspn03011
]
ACLV6H_17050
Ribosome [BR:
cspn03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ACLV6H_17050
Bacteria
ACLV6H_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
S1_2
S1CSD-TOTE-1
OB_RRP5_4th
SH3_2
Motif
Other DBs
NCBI-ProteinID:
XNP79562
LinkDB
All DBs
Position
complement(4398575..4400314)
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AA seq
579 aa
AA seq
DB search
MTNGEQTPETGSPASDSASPQDPANATAPTPRPDDAVPIPENASEKASENTVTPDPAPVD
TPSAAPAAESDSSAGDDAKPVARGSGPLAARGLGLAKPASPVATTDAGAAPSNKPAKKKK
SGGKKAPRPRLAGERGSTDNAPKVVPSGVTTPAAAKAPPKQGKVAVPSLRQPLSDDLQAE
LDMQLADSDIDSILGGGAGMPDRKEPLAEGSRLQGRVLKIHDDSVFIGMGGPDEGVVPFE
QFEQEPEIGSSVEVMVRGFNGEDGLYVLTLPGQAVDVSDWADMEEGSVVEATITGHNAGG
LECKVGGVRGFIPISQVTEYRVEDLSEFVDQRMICLVTEANERRGNLVLSRRAILERERE
EKRKEQLEKLEVGDELKGTVRSIKDFGAFVDLGGLDGLIHISKLSWDRVKHPSEVLEEGQ
EVQVKLEKVDKATGKISLSYRDLLENPWDTAEATFAAGTVHKGTVTRIANFGCFVRLAAG
IEGLVHISELAHHRVSKISAFVSEGDEVEVKVLSFDRDTQKIALSIKAAQTSAADTAKTK
PTEEEIGPPREMAVKSRHDGPLKGGNNRDTGGERFGLRW
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacggcgaacagacgcccgaaaccgggtcccctgcgtcggacagcgccagcccg
caagatcccgccaacgcaaccgcccccacacctcgcccggacgacgctgtcccgattccg
gaaaacgcgtcggaaaaggcgtcggaaaacacggtgacaccggatccggcgccggtggac
acgccgtcggccgccccggctgcggaatccgattcgtcggccggtgacgatgccaaaccg
gtggcacgaggcagcggtccgcttgccgcacgtgggctggggctggccaaacccgcgtcg
ccggtcgcaacgaccgatgccggggccgccccatcgaacaagcccgccaagaagaaaaag
tcgggcggcaaaaaggccccgcgtcctcgcttggccggcgaacgaggctcgaccgacaac
gctcccaaagtcgttcccagcggcgtgaccactccggccgccgccaaggcgccgcccaag
caaggcaaggtcgccgtcccgagtttgcggcaaccgttgtccgacgacctgcaggccgaa
ttggacatgcaactggccgattcggacatcgattcgattctgggtggcggtgccggcatg
ccggaccgcaaagaaccgctggccgaaggttcgcggttacaaggccgcgtcctgaaaatc
catgacgacagcgtcttcatcggcatgggcggcccggatgaaggcgtcgtgcccttcgaa
caattcgaacaagaaccggaaatcggcagctccgtcgaagtgatggtgcgcggtttcaac
ggcgaagacggcttgtacgtcctgaccttgcccggccaggcggtcgacgtcagtgactgg
gcggacatggaagaaggatccgttgtcgaagccacgatcacgggacacaacgccggcggt
ttggaatgcaaggtcggcggcgtccgtggcttcatcccgatcagccaagtcaccgagtat
cgcgtcgaagacctgtcggaattcgtcgaccaacgcatgatctgtctcgtgaccgaagcc
aacgagcgacgcggcaacctggtgctttcgcgtcgcgcgattttggagcgtgagcgagaa
gaaaaacgcaaggagcagttggaaaagctggaagtcggcgatgaactgaagggcacggtc
cgcagcatcaaagacttcggcgccttcgtcgatctgggcggactggacgggctgatccac
atcagcaagctcagctgggatcgcgtcaaacaccccagcgaagtgttggaagaaggccaa
gaggttcaggtcaaactggaaaaggtcgacaaggcgactggaaagatcagtctttcctat
cgcgacctgctggaaaacccttgggacaccgccgaagccaccttcgccgcgggcacggtt
cacaaaggcacggtgacccggatcgccaacttcggctgcttcgtccgtttggccgccggc
atcgaaggtttggtgcacatcagcgaattggctcatcatcgcgtttcgaaaatcagtgct
ttcgtttccgaaggcgacgaagtcgaagtcaaagtgctgtcgttcgatcgcgatacccaa
aaaatcgcattgtcgatcaaagcggcccaaacctcggccgctgacaccgcgaaaaccaaa
ccgaccgaagaagagatcggaccgccacgcgaaatggccgtcaagtcacgccatgacggt
ccgctgaaaggcggcaataaccgtgacaccggtggcgaacggtttgggctccgctggtaa
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