Crateriforma spongiae: ACLV6H_18490
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Entry
ACLV6H_18490 CDS
T11503
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
cspn Crateriforma spongiae
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspn03032
]
ACLV6H_18490
03036 Chromosome and associated proteins [BR:
cspn03036
]
ACLV6H_18490
03400 DNA repair and recombination proteins [BR:
cspn03400
]
ACLV6H_18490
DNA replication proteins [BR:
cspn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACLV6H_18490
Chromosome and associated proteins [BR:
cspn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACLV6H_18490
DNA repair and recombination proteins [BR:
cspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACLV6H_18490
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNP79822
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Position
complement(4785771..4786190)
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AA seq
139 aa
AA seq
DB search
MTKKDIVRTISEEVGLTQQQTKEIVQKTFDAIVDCLVRDQRIELRNFGVFEVKPRAARKA
RNPRTGQQVDVPSKHVVTFKPGKFMEARVRELDQCAAQKAAEATAGDDNRPEPNVHPDAA
PNASAGRPTGRWDDLSDPQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaaaaagacatcgtgcgaacgatctccgaagaggttgggctgactcaacaacag
accaaggaaatcgtccagaaaacgttcgatgcgatcgtcgactgtctggttcgggatcaa
aggattgaactgcggaacttcggcgtgttcgaagtcaaaccgcgggcggcccgcaaggcg
cgcaatcccaggaccggccaacaggttgacgttcccagcaaacacgtggtgaccttcaag
cccggcaaattcatggaagcacgcgtccgagaattggaccagtgtgccgctcagaaagcc
gccgaagccaccgccggtgacgacaaccgccccgaaccaaacgtccaccccgatgcggca
ccgaacgcatcggcggggcgaccgaccggtcgctgggatgacctttccgatccacagtaa
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