Crateriforma spongiae: ACLV6H_18625
Help
Entry
ACLV6H_18625 CDS
T11503
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cspn Crateriforma spongiae
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cspn03009
]
ACLV6H_18625 (rimO)
Enzymes [BR:
cspn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACLV6H_18625 (rimO)
Ribosome biogenesis [BR:
cspn03009
]
Prokaryotic type
ribosomal protein modification factors
ACLV6H_18625 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
XNP79848
LinkDB
All DBs
Position
4820321..4821748
Genome browser
AA seq
475 aa
AA seq
DB search
MKLPIVTDTASSKVPSPADSTGDGKARGQYAVVSLGCPKNLVDTEQMLGRLDHDGYRMVP
DVDDADFVIVNTCGFIESARDESLGAIDEMLQLKRDGKIRNVVVTGCLAERGQGELLKER
PEIDAMVGVFGRNDIVTVIDDLYSGLEEQRTVFKPAAIQPLSDSMRSAITPRHFAYLKIS
EGCDRLCTFCAIPKMRGKHYSKPIEQVVDEAKRLGDSGVREVVVVAQDTTYYGMDLYGRP
RLTELLTELDKIESIDWIRLMYFYPMYIDDDLIDVIAGARRVLPYIDMPLQHASDTMLKR
MSRKTTRASQEVILEKLRQRIDNLVMRTTMITGFPGETDDDFRQLCDFVAEQKFEHLGVF
TYSVEPDTPAAKLPGRVPEVVSLRRQEELMAIQQQIAFEWNESRVGTAVDVLIDAEVPDQ
PGLFMGRSVAEAPDIDGVVFVSSDDQTSTIEVGQMVRCEIVVANGYDVVAAPLDA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcccatcgttaccgataccgcgtcatccaaagtcccatcgccggctgattcc
accggtgacggcaaggcacgcggtcaatatgccgtcgtcagtctggggtgccccaagaac
ctggtcgataccgaacagatgctggggcgtttggaccatgacggctaccggatggtgccg
gacgtcgacgacgccgactttgtgatcgtcaatacgtgcggcttcattgaatcggctcgc
gacgaatcgctgggcgcgatcgacgaaatgctgcaactgaaacgcgacggcaagatccgt
aacgtcgtcgtcaccggttgtctggccgaacgtgggcaaggcgaactgctgaaggagcgc
cccgaaatcgatgcgatggtcggagtctttgggcggaatgacatcgtcacggtgatcgat
gatctgtacagcgggctggaagaacagcggacggttttcaagcccgccgcgatccagccg
ctttccgattcgatgcgatcggccatcaccccacggcacttcgcttatttgaaaatcagc
gaaggttgtgaccggttgtgtacgttctgtgcgatcccaaagatgcgcggaaagcactac
agcaagccgatcgaacaagtcgtcgacgaggccaaacggctgggtgacagcggcgtccgt
gaagtcgtcgtggtcgcacaagacacgacctattacggcatggacttgtacggtcgtcct
cggttgaccgaattgctgacggaattggataagatcgaatccatcgattggatccggctg
atgtacttttatccgatgtacatcgacgacgatttgatcgacgtcattgccggtgcccgg
cgtgtgttgccctacatcgacatgccgctgcaacacgccagcgacacgatgttgaaacgc
atgtcgcgaaagaccactcgcgccagccaagaagtgatcttggaaaagctacggcaacgg
atcgacaacctggtcatgcggaccaccatgatcacgggattccccggtgaaaccgatgac
gatttccgtcaactgtgtgactttgtcgctgaacaaaaattcgaacacttgggtgtgttc
acttacagcgtcgaaccggacacgccggcggcgaaacttccgggccgggtgcccgaagtc
gtctcgctgcgacgtcaagaagaactgatggcgattcagcagcagatcgcctttgagtgg
aacgagagtcgtgtcggaaccgctgtcgatgttttgatcgatgcggaagtccccgatcag
cccggcttgttcatgggccgcagcgtggccgaagcacccgacatcgacggcgtggtgttt
gtttcatccgatgaccagacctcgacgatcgaagtcgggcaaatggtccgctgtgaaatc
gtcgtggccaacggctatgacgtcgtggccgcgccattggatgcctga
DBGET
integrated database retrieval system
