Crateriforma spongiae: ACLV6H_19160
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Entry
ACLV6H_19160 CDS
T11503
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cspn Crateriforma spongiae
Pathway
cspn03420
Nucleotide excision repair
cspn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACLV6H_19160
03430 Mismatch repair
ACLV6H_19160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspn03400
]
ACLV6H_19160
Enzymes [BR:
cspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACLV6H_19160
DNA repair and recombination proteins [BR:
cspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACLV6H_19160
MMR (mismatch excision repair)
Other MMR factors
ACLV6H_19160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
XNP79950
LinkDB
All DBs
Position
4930422..4932860
Genome browser
AA seq
812 aa
AA seq
DB search
MTSTFGNASAMDAILRDLTPPQREAVQHIDGPLLILAGPGSGKTRVVTHRIANLLHHGID
AHQILALTFTNKAADEMRTRVQGLAPGRPVWMGTFHRFCAQQLRRYASMVGLSENYSIYD
TSDSKQAMKRAIEAAGVSTTHTSPEQIAASISHAKNRLIPPEMMTDASSMTARDAIAARV
YPVYQQQLLTSNAVDFDDLLFHFARLLRENPDVRSSLDQHYRYIMVDEYQDTNLAQYAIV
RALSIQQPNLAVTGDPDQSIYGWRGADLNNILDFEKDYPNVTTVRLEQNYRSTPNILRVA
DQLIRFNRRRKHKELFTDHPEGDPVVLRIYEDGYEEADDIADQILDAIHNEGLRPRDFAV
FCRMNALTRSLEHAMRKRGLPYQIVNGLEFYQRKEIKDLLAYLHLINNPNHDVALLRVIN
TPTRGIGAKTIARIQQHADRLGIPMLEAARRADEIESLPKRSASMVLNFVRLYDRLRVKA
TATLEDLLRYLVEETQFNDYLERTSVESTTNNPVANVDELINAAVEFDLQHPDEGSLELF
LEQVALVSDVDAFEESDDRVTLMTLHAAKGLEFPRVFIIAVEDELLPHRRSRETEAQYEE
ERRLLFVGITRAKQWLQLSHCKRRSIRGDMRPVVASAFLTELPRDDMRLVESSVDRDFFE
NEYSDGGYPDSWDLPAIQVGDDATASDDQTSQVQPPVITDEDVCQLPDHEGDDDVVREAV
ATESSYRRTAKRGKAKVSIAGGLKTAADLMAAGATPPGAYREGAVVSHPSYGQGTIVAVS
GRGPKRSVKVKFADEEASFLIAYAAADLSLVQ
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacgtttggcaacgcctcggccatggatgcgattctccgagacctgaccccg
ccccaacgcgaagcggtccagcacatcgacggtcccttgctgattctggccggaccgggc
agcggtaagacccgtgtggtcacccaccgcatcgccaacctgctgcaccacggaatcgac
gcccaccaaatcttggcgttgacgttcaccaacaaggcggccgacgaaatgcgaactcgg
gtgcaaggtcttgcgcccgggcgtcccgtttggatggggacgtttcaccggttttgtgct
caacagctgcgtcgctatgcatcgatggtggggctgtcggaaaactattcgatctatgac
acgtcggattcgaaacaggcgatgaagcgggccatcgaagccgccggcgtcagcacgact
cacacgtcgcccgaacagatcgccgcgtcgatcagccatgccaagaaccggttgatcccg
ccggaaatgatgaccgacgcttcatcgatgaccgcccgcgatgcgatcgccgcacgcgtc
tatcccgtctatcagcaacaactgttgacgtccaacgcggtcgactttgatgacctgctg
ttccattttgcaagattgctgcgcgaaaaccccgacgtccgcagcagcctggaccagcac
tatcgctacatcatggtcgacgaataccaagacaccaacttggcccaatacgccatcgtc
cgcgctttgtcgatccaacagccgaacttggccgtcaccggcgatcccgaccagtcgatc
tacggttggcgcggcgcggatttgaataacatcctggacttcgaaaaagactatcccaac
gtcaccaccgttcggctggaacagaactatcgcagcaccccgaacatcttgcgtgtcgcc
gaccaactgatccgcttcaaccgtcgacgcaagcacaaggaattgttcaccgatcacccc
gaaggcgatccggtcgttctgcggatttatgaagacggttatgaagaagccgacgacatc
gcggaccaaatcctcgatgcgattcacaacgaaggcttgcggccgcgtgatttcgctgtg
ttctgccgaatgaacgcgctgacccgatcgctggaacatgcgatgcgaaagcggggcttg
ccctaccagatcgtcaacgggttggagttttatcagcgcaaagaaatcaaggatctgttg
gcgtatctgcatctgatcaacaaccccaatcacgacgtcgccctgctgcgggtgatcaac
acaccgacgcgtgggatcggcgcgaaaacgatcgcacgaatccaacagcatgccgatcgg
ctgggcattccgatgttggaagccgcccgacgtgccgacgagatcgaatcgctgcccaag
cgttccgcttcaatggtgctgaacttcgtgcgtctgtacgaccgcctgcgagtcaaagcg
accgcgacgctggaagacctgttgcgatatctggtcgaagagacacagttcaacgattac
ctggaacggactagcgtcgaaagcacgacgaacaatccggttgccaacgtcgacgaattg
atcaacgcggcggtggaattcgatctgcagcatcccgacgaaggctcactagaactattc
ctggaacaggtggccctcgtttcggacgtcgacgcattcgaagaatccgacgatcgggtg
acgttgatgacgctgcacgcggccaagggattggagtttcctcgtgtcttcatcatcgcg
gtcgaagacgaactgttgccccaccgcaggtctcgcgaaaccgaagctcagtacgaggaa
gaacggcggttgttgttcgtcggaatcacccgcgccaaacagtggctgcaactcagccac
tgtaaacggcgtagcatccggggcgacatgcgaccggtggtggccagtgccttcttgacc
gaattgccacgcgatgacatgcgtttggtcgaatcctccgtcgaccgcgacttcttcgaa
aacgaatacagcgacggcggctatcccgacagctgggatttgccggcaatccaagtcggc
gatgatgcaacggcatccgatgaccagacgtctcaggtgcaaccacccgtcatcaccgat
gaagatgtttgccagttgcccgatcacgagggtgatgacgatgtcgtgcgcgaagccgtc
gccactgaatcgtcgtatcggcgaaccgccaaacgcggaaaagccaaagtctccattgca
ggtgggctgaaaacagcagccgacctgatggccgccggcgcgactccgcccggagcctac
cgcgaaggcgccgtggtctcgcatccaagttacggccagggaacgattgtcgcggtcagt
ggccgaggaccaaaacgtagtgtgaaggtaaaattcgcggacgaagaagccagttttctg
atcgcctatgcggcggccgatctcagtctggttcaatag
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