Crateriforma spongiae: ACLV6H_20800
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Entry
ACLV6H_20800 CDS
T11503
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cspn Crateriforma spongiae
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cspn03016
]
ACLV6H_20800 (truB)
Enzymes [BR:
cspn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACLV6H_20800 (truB)
Transfer RNA biogenesis [BR:
cspn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACLV6H_20800 (truB)
Prokaryotic type
ACLV6H_20800 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XNP80254
LinkDB
All DBs
Position
complement(5429266..5430258)
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AA seq
330 aa
AA seq
DB search
MKFFGFLNCHKPPGMTSRDLVNLGTGAIRKSYRERLAVVVSDTDGSPEQSDAPTPRRKPP
KVGHAGTLDPLAEGVLVMGVGPAAKLTSYLQLASKQYQAHFVLGQRSESGDLEQPVQTID
DAPIPTLDELQSAARQLTGRIRQVPPSHSAIKINGRRAYKMARKGVEVPMPARAVDIHEL
TIQRYEYPNVWLDICCGSGTYIRTLGMDLARRCGTESVMHHLVRTRVGQFELADAMSVQQ
IREGRCMSLLRPANEGLAHLTTLHLDDEQTWRITNGLSLHVSRTRTTAAGDKEVRDAAAI
DPSGDVCAIAQRRSDHWRPTRVFHKRLFTL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcggtttcctgaactgccacaaacccccgggaatgacctcgcgtgacttg
gtcaacctgggaacgggagcaatacgcaaatcgtatcgcgaacgtttggccgttgtcgtt
tccgacactgacggttcgcccgaacagtctgacgccccgacgccccgccggaaacctccc
aaggtcggacacgccggcacgcttgatccgttggccgaaggggtgctggtcatgggcgtc
ggcccggcggcgaagctgactagttatttgcaactggcgtccaaacagtatcaagcccac
ttcgtcttgggtcagcggagcgaatctggcgatctggaacaaccagtccagaccatcgac
gacgctcctatcccgacgctggacgagcttcaatccgctgcccgccaactgaccggccgc
atccggcaagttccgcccagccattcggcgatcaaaatcaacggacgccgtgcctacaag
atggctcgcaaaggcgtcgaagtgccgatgcccgcccgcgccgtcgacattcacgaattg
accatccagcgatacgaataccccaacgtttggctggacatttgctgtggcagcggcact
tacattcggacgttgggcatggacctggcacggcggtgcggaaccgaatcggtgatgcac
catttggtgcggactcgggtgggtcagttcgaattggccgacgcgatgtccgtccaacag
attcgcgaaggccggtgcatgtcactgcttcggcccgccaacgaaggtttggcccatctg
accacgctgcacctggatgacgaacagacctggcgaatcaccaatggtctgtcacttcat
gtttcgcgaactcggacgaccgcggcgggcgacaaagaggttcgcgatgcggccgcaatc
gatccctcaggcgatgtttgcgcgattgcacagcgacgcagcgatcattggcgccccacg
cgggtgtttcacaagcggcttttcacgctctag
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