Crateriforma spongiae: ACLV6H_23075
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Entry
ACLV6H_23075 CDS
T11503
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
cspn Crateriforma spongiae
Pathway
cspn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cspn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACLV6H_23075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cspn03000
]
ACLV6H_23075
Transcription factors [BR:
cspn03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACLV6H_23075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
GAF_2
HTH_8
Mg_chelatase
GAF_3
AAA_5
AAA
AAA_2
AAA_16
Acetyltransf_5
bpMoxR
AAA_3
GAF_EFCB5_1st
HTH_50
TIP49
Motif
Other DBs
NCBI-ProteinID:
XNP80674
LinkDB
All DBs
Position
6111450..6113021
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AA seq
523 aa
AA seq
DB search
MHNDQASAHACAAQKDRWRHQMAALSSIAQVLNARSGQSQTLHDILQVLEQTLGMVRTTV
MLLAADEQRLVIGATRSVPPDQAQSVHYQRGEGITGRVLESGRSVVVPSVSSEPEFVDRI
HQRARRHADDSSFICVPIMVGREVIGTLAADLPPGESGQRDADELDEAERALTIVAAMIG
FDVRVRRDEREEHEALQEENLRLRDALEERFRPENIIGNSRPMRAVYTRIRRVATGNTTV
LIRGETGTGKELVASAIHYSSGRSNQPYIRVNCAQLSETLLESELFGHEKGAFTGAIERR
IGRIEEAENGTLFLDEIGDFPPAIQVKLLRFLQEHEFERVGSNETLTANVRVIAATNCDL
ESALKEKTFRQDLYYRINVFPIVLPALRERRDDILLLANHFAEKYAREMGKQIRRFSTPA
IDMLMAYHWPGNVRELENCIEHAILLADGDAILGHHLPPTLEMPDAADDSVSSRLDIRVE
ALERDMISDALKCASGNAAAAARQLGITARMIRYKMKKLGLET
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaatgatcaagcatcggcacacgcctgcgcggcacagaaggaccgctggcgacac
cagatggcggcattgtcatcgatcgcacaggtgttgaacgcacgctcaggtcaaagccaa
acgctgcacgacatcctgcaagttctggaacagactctggggatggtccgaaccaccgtg
atgctgttggccgccgacgaacaacggttggtcatcggcgcgacccgcagcgttccacct
gaccaagcacaatcggttcactatcaacgtggcgaaggcatcaccggccgggtcttggag
agcggtcgttccgtggtcgtgcccagcgtttcaagtgaacccgaattcgtcgaccgcatc
caccagcgggcacgccgacacgcggatgacagtagtttcatttgcgttcccatcatggtc
ggacgcgaagtgatcgggaccttggctgctgacctgccgcccggtgaatcgggtcaacgc
gacgcggatgaactggacgaagccgaacgggccctgaccatcgtcgcggcgatgatcgga
ttcgacgttcgcgtgcgacgcgacgaacgggaagaacacgaagcactgcaagaagaaaac
ttgcggctgcgcgatgccttggaagaacgctttcgtccggaaaacatcatcggaaattcg
cgtccgatgcgagccgtctatacacggatccgccgcgtcgcgaccggcaacacaaccgtt
ctaattcgcggcgaaaccgggaccggcaaagaactggtggcgtcggcgattcactattcc
agcggtcgatcgaaccagccctacattcgggtcaattgcgcgcagttgagcgagacgttg
ctggaatcggaactgttcggccacgagaaaggtgcgttcaccggagccattgagcgacgg
atcggacgcatcgaagaagccgaaaacggaacgttgttcctggacgaaattggtgacttc
ccgcccgcgattcaagtcaagttgttacggttcctgcaggaacatgaattcgagcgagtc
ggttccaatgaaacgttgacggcgaacgtccgagtcatcgcggcgaccaactgtgacttg
gagagtgcactgaaggaaaaaacgtttcgccaagacctgtactatcgcatcaacgttttt
ccgatcgtgctgcccgcactgcgtgaacgacgcgacgacatcttgctgctcgcgaatcac
ttcgccgaaaagtatgcacgcgaaatgggcaaacaaattcgccggttcagcacaccggcg
attgacatgttgatggcctatcactggccgggcaacgttcgagagctggaaaactgcatc
gaacacgccatcttgttggccgacggtgacgcgatcctgggccatcacttgccgccgacg
ttggagatgccggatgcggccgacgattcggtatccagccggctggacatccgcgtcgaa
gcactggaacgcgacatgatcagcgacgcgttgaaatgtgcttcgggcaacgccgccgct
gcggctcggcaactgggcatcaccgctcgaatgatccggtacaagatgaaaaagctgggc
ttggaaacttag
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integrated database retrieval system
