Caminicella sporogenes: QNI18_06025
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Entry
QNI18_06025 CDS
T09087
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cspo
Caminicella sporogenes
Pathway
cspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QNI18_06025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspo03400
]
QNI18_06025
Enzymes [BR:
cspo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QNI18_06025
DNA repair and recombination proteins [BR:
cspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QNI18_06025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_RecD2
AAA_19
AAA_30
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
HHH
Helicase_RecD
PIF1
HHH_2
nSTAND3
AAA_22
T2SSE
UvrD_C
AAA
PhoH
SLFN-g3_helicase
AAA_28
UvrD-helicase
NTPase_1
RsgA_GTPase
NPHP3_N
ATP_bind_1
TrwB_AAD_bind
SRP54
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WIF96124
LinkDB
All DBs
Position
1230794..1233019
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AA seq
741 aa
AA seq
DB search
MSVEIKGVVKEIVFKNEENGYIVADVDTDDGEITVVGYIPIINVGETMSFTGNFTIHPIY
GKQLQVVSSKQIMPSTLDGIISYLSSGLIKGIGPKMAERIVKKFGKDSLDVIQYRPHLLT
QVNGIGEKKAKIIAQSFEEQREIKEVMLFLQQYGISVAYAMKIYKKYRDNTVEYIRENPY
RLADDITGIGFKMADSIAKKMGVDPESPYRIMCGIKFVLNQYSLEGHTFAKKNELIERAS
NILSVDKELVEGGINTLTINGEIHQEDIDGEIAVFSMAFYYAETGVCKKIIELANTKFDD
IDIDLDEEISRIEKESNIALAEKQKLAIKESVKNGVTVITGGPGTGKTTTVNSIIKIFEK
MNLDIALAAPTGRAAKRLTETTGREAKTIHRLLEYSFSEDGIGMRFIKDGDEPLTADVII
VDEVSMIDILLMYHLLKAVMPGTRLILVGDVDQLPSVGPGNVLHDIIESEIVKVVKLTEI
FRQAEESMIVVNAHKINKGLKPILNAKGKDFYFISKRNQDDILNTIKELCLKRLPNFSNC
DPIKDIQVLTPMKNSKIGTINLNCELQDILNSKAVHKKEKKIGERLFRVGDKVMQVKNNY
NIKWKSKDNLREGEGIFNGDIGYVCDIDEELKILTVLYDDEKYVEYDFAGLDEIELAYSI
TIHKSQGSEFPIVVMPVSWAPPMLLNRNLLYTAVTRAKELVVLVGAEKYLYMMIKNKRDM
NRNSGLKYRFKRIVEVYNQTF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgagataaaaggggtcgtaaaagaaatagtttttaaaaatgaagaaaatggg
tatattgttgcagatgtagatacagacgatggagaaataactgtagtaggatatattccc
attatcaatgtaggagaaactatgtcttttacaggaaattttactattcatcctatttat
ggaaaacagcttcaagtagtcagcagtaaacaaatcatgccttcaactttagatggtatt
ataagctatttgagttctggacttattaagggaataggacctaaaatggctgagcgtata
gtaaaaaagtttggaaaagatagtttagatgttattcaatatagaccacaccttcttact
caagtaaacggtataggagaaaaaaaggccaaaattattgcacaatcttttgaagaacaa
agagaaataaaagaagtgatgctctttttacagcagtatggaatatctgtggcgtatgcc
atgaaaatatataaaaagtacagggataatacagtagaatatattagggaaaatccatac
agattagctgatgatataactggtataggatttaagatggcagatagtattgcaaagaag
atgggagtagaccctgaatcaccttatagaataatgtgtggaataaaatttgttttaaat
cagtatagtttagaaggacatacttttgctaaaaaaaatgaacttatagaaagagcttca
aatatattatctgttgataaagagttagtagaaggcggaataaatactcttactataaat
ggcgaaattcatcaagaagatattgatggagaaatagcagtattttctatggcgttttac
tatgctgaaacaggagtatgcaaaaaaataatagaacttgcaaatacaaaatttgatgat
atagatatagatttagatgaggaaataagtaggatagaaaaagaaagtaatatagcatta
gctgaaaaacaaaaacttgctataaaggaatcagtaaaaaatggagtaactgttataact
ggaggaccgggaacgggtaaaactacaacggtaaatagtataataaaaatatttgaaaag
atgaatttagatatagctttagctgccccaacaggcagagcagctaaaagacttacagaa
actactggtagggaagctaagacaattcacagacttttagaatactcgtttagtgaagat
ggaattggtatgaggtttataaaagatggggatgagccacttacagctgatgtcataatc
gtagatgaagtatccatgatagatatacttttgatgtatcatttactaaaagctgttatg
ccggggacaagattgatattagtaggtgatgttgaccagcttccatcagtaggacccgga
aatgtgcttcatgacattatagaaagtgaaatcgtaaaagttgtaaagttaactgaaata
ttcagacaggctgaggagagtatgatagtcgtaaatgcacataaaataaataagggacta
aaaccgatattaaatgcaaagggaaaagatttttattttatttcaaagagaaatcaagat
gatattttaaatacaattaaagaactttgtttaaaaagacttcccaattttagcaattgt
gaccccattaaagatatacaagtactaactcccatgaaaaatagtaagataggaactata
aatttaaattgtgagcttcaagatatactaaattctaaagcagtgcacaaaaaggaaaag
aaaataggagaaagactatttagagtaggcgataaagtcatgcaggtcaagaataattac
aatatcaaatggaaaagtaaagataatttaagggaaggcgaaggcatttttaatggagat
ataggatatgtttgtgatatagatgaagaactaaaaattttgacagttttatatgatgat
gaaaaatatgtagagtatgattttgcgggattagacgagatagaactggcatattccatt
acaatccataaaagtcagggtagtgaatttccaatagtagttatgccagtgagttgggct
ccaccaatgttacttaatagaaatctattatacacagcagtaacaagagcaaaagaatta
gtggtattagttggagcagagaaatatttatatatgatgataaaaaataaaagagatatg
aatagaaattcaggattaaaatatagatttaaaagaattgttgaagtttataatcaaaca
ttttaa
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