Caminicella sporogenes: QNI18_10225
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Entry
QNI18_10225 CDS
T09087
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cspo
Caminicella sporogenes
Brite
KEGG Orthology (KO) [BR:
cspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspo03032
]
QNI18_10225 (topA)
03400 DNA repair and recombination proteins [BR:
cspo03400
]
QNI18_10225 (topA)
Enzymes [BR:
cspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QNI18_10225 (topA)
DNA replication proteins [BR:
cspo03032
]
Prokaryotic type
DNA Topoisomerases
QNI18_10225 (topA)
DNA repair and recombination proteins [BR:
cspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QNI18_10225 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DNA_ligase_ZBD
Zn_ribbon_GRF
DUF1284
Toprim_4
Toprim_2
Carbam_trans_C
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WIF94627
LinkDB
All DBs
Position
2045472..2047532
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AA seq
686 aa
AA seq
DB search
MAHSLVIVESPAKAKTIGKFLGKKYKVKASIGHIRDLPKSKMGIDIENNYKPNYITIRGK
GKVIKELKEEAKKADKIYLATDPDREGEAISWHLANILSIDENKNCRIEFNEITSKAIKK
AINNPRPIKKTLVDAQQARRILDRLVGYSISPILWRKVKKGLSAGRVQSVATKLICDRER
EINNFVPKEYWTIEVALCDESKTKEFEALFYGTDKQKIEINSKEEVDLIIDEIKNNTFVI
SNVTKKLKSRKPYHPFTTSSLQQEASNKFGFSTKKTMMIAQQLYEGIDIADGGTVGLITY
IRTDSTRISEDFKKEAEEYIVEKYSKKYLPKYTRKVTNKKDAQDAHEAIRPTSVYRTPDS
IRDSLSKDQYNLYKLIWERFVASQMADSTYYSYSIEIKNGKYVFKAKGIEQVFDGFLKVY
SYAQINENILPKVEKDEILTCKDINPKQHFTQPPPRYTEATLVKEMEDKGIGRPSTYAPT
ISTILSRGYVVRDGKNLKPTDLGFLVNDILEKYFSDIVDVDFTADLEEKLDKVELGQISW
IKLIDDFYKPFSKILSKAEKEIEKVDLTEKTDEICEKCGSPLVIKHGRFGKFLACSNYPD
CNFTKSILIKTGVKCPICGGDIIVRKTKKGRTFYGCSNYPDCKFMTWEQPIDKRCPKCQS
ILVVKSTKNKKTARCLNKDCDFKEDL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcacttgtaatagttgaatcaccagctaaagctaagacaataggtaaattt
ttaggcaaaaaatataaagttaaagcctccataggacatattcgtgatttgcctaagagc
aaaatgggtatagacatagaaaataactataaacctaattatataactataagaggaaag
ggtaaagttattaaagagttaaaagaagaagccaaaaaagcagataaaatttatttggct
acagaccctgatagggaaggggaggctatttcttggcatttagctaatattttatcaatt
gatgaaaataaaaactgcaggatagaatttaatgaaataacttcaaaagctatcaaaaaa
gctattaataatccaagacctataaaaaagactttagtagatgctcagcaggctaggaga
atattagatagattggttggatatagtattagtccaattttatggcgaaaagtcaaaaag
ggattaagtgcaggtagggtacaatctgtagctactaaacttatatgtgatagggaaagg
gagataaataactttgttccaaaggaatattggactatagaagttgcgctttgtgatgaa
agtaaaactaaggaatttgaagctttattttatggtacagataaacagaaaatagaaata
aacagtaaagaagaagtagatttaataatagatgaaataaaaaataatacatttgtaatt
tcaaatgtaacaaagaagttaaaaagtagaaagccttatcatccttttacgactagtagt
cttcaacaggaagcatctaacaagtttggattttctactaaaaagacgatgatgatagct
caacaattatatgaaggaattgatattgctgatgggggaacggttggattaataacatat
ataagaactgactctacaaggatttcagaagactttaaaaaagaagctgaggaatatata
gttgaaaaatattctaaaaaatatcttcctaaatatactcgtaaagtaacaaacaaaaaa
gatgcacaagatgctcatgaagctataagacctacatctgtttatagaacacctgattct
ataagagattcattgagtaaagaccaatataatttatataaattgatttgggagagattt
gtagcaagtcagatggctgattcgacttattattcatattcaatcgaaataaaaaatggt
aaatatgtttttaaagctaaaggaatagagcaagtttttgatggttttcttaaagtatat
tcatatgctcaaataaatgaaaatattttacctaaggtagaaaaagatgaaattttaact
tgtaaggatataaatccaaaacaacattttacgcaacctcctccaaggtatactgaagct
acactagtgaaagaaatggaggataaaggaataggcagaccaagtacttatgcacctaca
atatctactatattgagcagaggatatgtagttagagatggaaaaaatttaaaacctact
gatttaggatttttagtaaatgatattttagaaaagtatttttctgatatagtagatgta
gattttactgccgatttagaggaaaagttagataaagtagaattaggtcaaatatcttgg
ataaaactgattgatgatttctataaaccttttagcaaaattttaagcaaagcagaaaaa
gaaatagaaaaagttgaccttacagaaaagacagatgaaatttgcgaaaaatgtggaagt
cctttagtaataaaacatggtcgctttggtaaatttttagcatgttcaaactatcctgac
tgtaattttacaaagtctatactaatcaagacaggagttaagtgtcctatatgtggtgga
gatataattgttagaaagactaaaaaaggcagaactttttatggatgtagcaactatcct
gattgtaaatttatgacatgggaacaacctattgataaaagatgtccaaaatgtcaatca
attttagttgtgaaaagtacaaaaaataaaaaaacagcaagatgtcttaataaagattgt
gattttaaggaagacttataa
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