Caminicella sporogenes: QNI18_10410
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Entry
QNI18_10410 CDS
T09087
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
cspo
Caminicella sporogenes
Pathway
cspo02020
Two-component system
cspo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cspo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QNI18_10410
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QNI18_10410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cspo03021
]
QNI18_10410
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cspo02035
]
QNI18_10410
Transcription machinery [BR:
cspo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QNI18_10410
Bacterial motility proteins [BR:
cspo02035
]
Flagellar system
Flagellar assembly proteins
Stator
QNI18_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF1870
GerE
DUF134
UPF0122
HTH_24
HTH_5
HTH_23
HTH_28
Sigma70_ECF
Gp44_C
Motif
Other DBs
NCBI-ProteinID:
WIF94663
LinkDB
All DBs
Position
2077790..2078524
Genome browser
AA seq
244 aa
AA seq
DB search
MSNNELWKLYKEKKSKAIKQKLILEYIELVKIIAGRLYISYNSNVEYEDLVSYGILGLID
AIEKFDPDKNVKFETYANFRIRGAIIDQLRNLDWVPRSIRQKFKRLEDIIQKLQNKIGLD
IEDEVIAKEMGISLEELNELYSEVSIFSVISLDEKLSENNNYDIPSDEIESNPESNFMKE
ETKRILREVIEKLPEREKMIIKLYYFSELTYKEISNILNISESRVSQLHTKCIIKLRNAI
SNLF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatgagttgtggaaactttacaaagaaaaaaaatcgaaagcaataaaacaa
aaattaattcttgaatatattgaattggttaaaattattgcaggaagattatatatttct
tacaattcaaatgttgaatatgaagatttagttagttatggtatattaggtttaattgat
gccattgaaaaatttgacccagataaaaatgttaaatttgaaacttatgctaattttaga
attagaggtgcaattatcgatcaacttaggaatttagattgggttcctagaagtataaga
cagaaatttaaacgattagaagatattattcaaaaacttcaaaataaaattggattagat
attgaagatgaagttatagctaaagagatgggtataagtttagaggagttaaacgaatta
tattctgaagtttcgatattttctgtcatttctttagatgaaaaattatctgaaaataac
aattatgatataccttcagatgagattgaatccaatcccgaatcaaattttatgaaagaa
gaaactaaaagaattttaagagaagttatagagaaactacctgaaagggaaaagatgata
attaaactctattacttctctgaattgacatataaagaaatttcaaatattttgaacata
tcagaatcaagagtatctcagcttcatacaaaatgtattataaaacttagaaatgccata
tctaatttattttaa
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