Caminicella sporogenes: QNI18_10480
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Entry
QNI18_10480 CDS
T09087
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cspo
Caminicella sporogenes
Pathway
cspo03030
DNA replication
cspo03430
Mismatch repair
cspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNI18_10480
03430 Mismatch repair
QNI18_10480
03440 Homologous recombination
QNI18_10480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspo03032
]
QNI18_10480
03400 DNA repair and recombination proteins [BR:
cspo03400
]
QNI18_10480
Enzymes [BR:
cspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNI18_10480
DNA replication proteins [BR:
cspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNI18_10480
DNA repair and recombination proteins [BR:
cspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNI18_10480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
Rv2179c-like
tRNA_anti-codon
RNase_H_2
HHH_3
DEDDh_C
DNA_pol3_a_NI
Zn_Ribbon_TF
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WIF94677
LinkDB
All DBs
Position
2089096..2093367
Genome browser
AA seq
1423 aa
AA seq
DB search
MNKFNNEIFIKILNDENSISVESIIYNKSTKTLKLNLLLNKIIDKIKLNKIEEYIKSNLP
FIADFKVHTSYKNLDIDIEEIVSKYWDNIIYEVKNTSPALIGWLNNCNKKFDKNLNTLNI
EVSDFIALENLNKKRCDKLIQDIFKNDFNISIKVDLKANDSLFANQSEYIKKRDKELNKL
IEDIVINSNAKPKQDSKKSKSISKSGSIVMGQNIGDAPVKIVNLSEEDGTVCVEGEIFEI
EKRELKSGKILISLAITDYTSSIGIKIFAKKEDASAILEKIKKGKHYKVKGLVRYDTFER
ELVIMARDINETEKKVRLDNAHQKRVELHAHTKMSSMDGICTATDLIKRAAEWGHKAIAI
TDHGVVQAYPEAIDASKKFGIKVIYGMEGYIVNDGAPIVINSNNKPLEQAFIVFDIETTG
LSFKHDKITEIGAVKIENGKVIDRFSSLINPQIKIPEKIVKLTGITDEMVKDKPTIDKVL
PKFIEFIGDNPVVAHNASFDTSFIKENCSLLGISFKNPIVDTLTLSRVLLPNLKKHRLNV
LAKHFNVNLENHHRAVDDAEATAEIFIKLLTMLKEKNISKLNEINNLSSNSTDYTKLDTY
HINILVKNYTGLKNLYKLVTHSHLKTFYKRPRIPKSLLSSMREGLIIGTACEAGELYRAI
LKNKDESEIESIVNFYDFLEVQPIENNSFMIEKGIVKSYDDLKEINKKIIELGKKYNKPV
VATGDVHFLEPHDEIIRRILMTGQGYSDADNQPPIYFKTTEEMLKDFDYLEDEIAREIVI
ENPNKIADSVENIIPIPQETYPPRIEGADEDLRNMCYEKAKSIYGSPLPELVQKRLDREL
NSIISNGYAVMYIIAHKLVTKSLRDGYLVGSRGSVGSSFVATMSDITEVNPLPPHYICPN
CKKSEFITDGSYGSGADLPDKICPNCGTLYKKDGHDIPFEVFLGFEGDKEPDIDLNFAGE
YQPTAHKYTEELFGKGYVYRAGTIGTLAEKSAFGFAKKYFEEKNISVNSKELLRLASCCT
GIKRTTGQHPGGIMVVPNYKEIHDFTPVQYPANDKSSGVVTTHFDYHAISGRLLKLDILG
HDVPTIIKMLEEFTGINPQDIRLDDKDTIKIFTSTETLNLVDDDFDIEVGSLGIPEFGTK
FVRQMLIDTQPTTFAELVRISGLSHGTDVWINNAQELVRQGIAELKDVISTRDDIMNYLI
LKGLPPKEAFTIMERVRKGKGLTPENEELMKKNNVPKWYIDSCNKIKYMFPKAHAVAYVM
MSFRIAYFKVHYPLAFYATYFTTKVDDFDADLICKGKDVVKEKINQLNNESNKLTQKEKD
LLTVLEVAYEMYCRGFNFLKVDLYESDSDKFLIKDNAILPPLRSLQGVGESAARNIAHER
KNGEFLSIEDIRIRTKVSKTVIETLQAHGCLKNLPKANQLSLF
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtttaataatgaaatatttataaaaatattaaacgatgaaaattctatttca
gttgaatcaataatatataataaatctactaaaacattaaagttaaatttgctgctcaat
aaaataatagataaaataaaattaaataaaatagaagaatatattaaaagtaatttacct
tttattgccgattttaaagttcatacatcatataaaaatttagatatagatatagaggaa
attgtttcaaaatattgggataacataatatatgaagtaaaaaatacaagtccagcttta
ataggctggcttaataattgtaataaaaaatttgataaaaatttaaacactttaaatata
gaagttagcgattttatagctttagaaaatttaaacaaaaaaagatgtgataaacttata
caagatatatttaaaaatgattttaatataagtataaaagtagatttaaaagcaaatgac
agtctttttgctaatcaatctgagtatattaagaaacgagataaagagttaaacaaatta
attgaagatatagttataaattcaaatgctaaacctaaacaagatagtaaaaaaagcaaa
tcaatttctaaatcaggtagtattgttatgggtcaaaatattggagatgctccagtgaaa
attgttaatttatctgaagaagatgggactgtatgtgttgaaggtgaaatatttgaaata
gaaaaaagagaactaaaaagtggcaaaatattaatttctcttgcaattacagattatact
tcatctataggaataaaaatttttgcaaagaaagaagatgcttcggcaatacttgaaaaa
ataaagaagggtaagcattataaagtaaaaggattagtacgttatgatacatttgaaaga
gaattagtcataatggcaagggacattaatgaaacagaaaaaaaagtcagattagataat
gcacatcaaaagagagtagagcttcatgcccatacaaagatgagctctatggacggaata
tgtactgcaacagatttaataaagagagcagctgaatggggacataaagctattgcaatt
actgaccacggtgttgtacaagcttaccctgaggcaattgatgcaagtaaaaaatttggt
attaaagttatatacggaatggaaggatatatagttaatgatggagcacctatagtaatt
aacagtaataataaacctttagagcaagcttttatagtatttgatattgaaactactgga
ttgtcatttaaacatgataagattactgaaataggtgcagtaaaaattgaaaatggtaaa
gttattgacagattttcttcacttattaatcctcaaattaaaatacctgaaaaaatagta
aaattaactggtataacagatgaaatggtaaaagataaaccaactatagataaagtgctt
ccgaaatttattgaatttataggagataatccggtagtagcacataatgcttcatttgat
acatcttttattaaagaaaactgcagtttacttggtataagttttaaaaatccaatagtt
gatacacttactttgagcagggtacttcttccaaatttaaaaaagcatagattaaatgta
ctagctaaacattttaatgtaaatttagaaaatcatcatagagcagtagatgatgctgaa
gcaacagcagaaatatttataaaattactgactatgctcaaagaaaaaaatatttcaaag
cttaatgaaataaataatctatcttctaattcaacagattatactaaactagatacttat
catataaatatattggttaaaaattatactggtttaaaaaatctttataagctagtaact
cattctcacttaaaaactttttataaaagacctagaatacctaaaagtttactttcatct
atgagagaaggtttaataatcggtacagcttgtgaagcaggagaactttatagagctatt
cttaaaaataaagatgaatctgaaatagaatctattgtaaatttttatgattttctagaa
gttcagccaatagaaaataatagttttatgattgaaaaaggaattgtaaagagttatgat
gatttaaaagaaattaataagaaaataattgagcttggaaaaaaatataacaaacctgta
gttgcaactggcgatgttcattttttagaaccacatgatgaaattataagaagaatatta
atgactggacaaggatattctgatgcagataatcagcctcctatttattttaagactaca
gaggaaatgctaaaagactttgattatcttgaagatgaaattgcaagagaaatagtcata
gaaaatccaaataaaattgctgattctgttgaaaatataatacccattcctcaagaaact
tatcctcctagaatagaaggtgctgatgaagatttgaggaatatgtgttatgaaaaagca
aagagcatttatggcagtccgcttccagaattagttcaaaaaagacttgatagagaatta
aactcaattataagcaatggctatgctgtaatgtatattattgctcataaattagttact
aaatcgctgcgtgatggataccttgtaggttctagaggttctgtaggttcttcatttgta
gctactatgagtgacataactgaagttaatccactaccgccgcactatatatgtccaaat
tgtaaaaaatctgaatttattacagatggttcttatggaagtggtgcggatttacctgat
aaaatatgtccaaattgtggtacattgtataaaaaagatggtcatgatataccttttgaa
gtgttcctcggatttgaaggagataaagaaccagatattgacctcaactttgcaggcgaa
tatcaaccaacagcacataaatatactgaagaacttttcggcaaaggatatgtctataga
gctggtacaattggtactttagctgaaaaatctgcttttggatttgcaaaaaaatatttt
gaagaaaaaaatatatctgtaaatagtaaagaacttcttagattagcttcttgctgtaca
ggaataaaaagaacaacagggcagcatcccggtggaattatggtagttccaaattataaa
gaaattcatgattttactccagtgcagtatcctgctaatgataaatcttctggtgtagtt
acaactcattttgattatcatgctataagcggtaggttacttaaacttgatatattgggt
catgatgttccaacgattataaaaatgttagaagaatttacaggtataaatcctcaagat
atacgattagatgataaagatactataaagatatttacttctactgaaactttaaactta
gttgatgatgattttgatatagaagttggttcgcttgggattcccgaatttgggactaag
tttgtaagacagatgttgattgatacacagccaactacatttgctgaattagtcagaata
agtggactttcacacggaacagatgtatggattaataatgcacaagaattagtaagacag
ggcatagctgaattaaaagacgttatatctacaagagatgacattatgaattatttaata
ttaaaagggctacctcctaaagaagcatttacaatcatggaaagagtgagaaaaggtaaa
ggattaactcccgaaaatgaagagcttatgaagaaaaataatgttccaaaatggtatata
gattcttgtaataaaataaagtatatgtttcctaaagctcatgccgtagcatatgtaatg
atgtcgtttagaatagcgtattttaaagttcactatccattagcattttatgctacgtat
tttacaactaaagtagatgactttgatgcagatttgatatgtaaaggaaaagatgttgta
aaggaaaagataaatcaattaaataatgaaagtaataaacttacacaaaaggagaaagat
ttgcttacagttttagaagtagcttatgaaatgtactgtagaggctttaatttcttaaaa
gttgacctttatgaatcagattcagataagtttttaattaaagataatgcaattttgcca
cctttaaggtctctgcagggtgtgggagaaagtgcagcaagaaatattgcacatgaaaga
aaaaatggagaatttctatctattgaagatattagaataagaaccaaagtatcaaaaact
gtcatagaaacgcttcaggctcatggttgtttgaaaaatcttccaaaagcaaatcaatta
tctctattttaa
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