Caminicella sporogenes: QNI18_11805
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Entry
QNI18_11805 CDS
T09087
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cspo
Caminicella sporogenes
Pathway
cspo02020
Two-component system
cspo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cspo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QNI18_11805 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QNI18_11805 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cspo03021
]
QNI18_11805 (rpoN)
Transcription machinery [BR:
cspo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QNI18_11805 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
MarR_2
HTH_3
HTH_23
HTH_38
Sigma70_r4
HTH_Crp_2
HTH_24
HTH_12
HTH_AsnC-type
Sigma70_r4_2
HTH_AraC
HTH_21
LacI
HTH_5
HTH_31
MCM_WH_arc
Motif
Other DBs
NCBI-ProteinID:
WIF94929
LinkDB
All DBs
Position
complement(2368722..2370089)
Genome browser
AA seq
455 aa
AA seq
DB search
MRMSYGLNLVQTQKLIMTPELKQAIEILQYNSVELNQFIQEELLNNPILEVPQDKSEIKN
SDLIDWKEYFKYSENFSYYNKNVDYEEREEVSFDNFVSNETTLTDHLLFQLQFTLLKGEK
KLAAEYIIENIDTNGYLRLDNKEIMMRYRLSEDEVENIIKIIQTFEPVGVGARNLRECLL
IQLENKGIKDKIIYKIVSDFLDELASNKINYISKKLNISPHEVQKAVDFIKTLEPKPGRT
FSSLRDVKYITPDVIVEKIDNEYIIVVNDITAPKLTINNYYRKLLLNSEIGNNTSSYINR
KLNSAIKIIKSIQQRRNTIYKVVKAIVNYQKEFFDKGTIYLKPLTLREIADEIGMHESTV
SRAVNGKYLQCPRGIFELKYFFQSGVSNNYGDGMSAESIKSIIKELIDGEDSKKPLSDQA
ISNELNKIGIKISRRTVAKYRDEMKIPSSSKRKRY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtcatatggcttaaatttagtacagactcaaaaacttataatgactccagaa
ttaaaacaagctattgaaatactgcagtataattcagttgaattaaatcagtttattcaa
gaagaattattaaataatcctattcttgaagttcctcaagacaaaagtgaaataaagaat
agtgatttaatagattggaaagaatactttaaatacagtgaaaatttcagttattataat
aaaaatgtggattatgaagaaagagaagaagtttcttttgataattttgtgtctaatgaa
actacacttacagaccacctattgtttcaattacagtttacacttcttaaaggtgaaaaa
aaattagctgctgaatacattattgaaaatattgatactaatggttatttaagattagat
aacaaagaaattatgatgagatatagattatcagaagatgaagtagaaaatattataaag
ataattcaaacgtttgaacctgttggagtaggggctagaaacttaagagagtgtctttta
atacagttagaaaataaaggtataaaagataaaattatatataaaatagtatctgatttt
ttagatgagcttgcaagcaataaaataaactatatatcaaaaaaattaaatatttcacct
catgaagtacaaaaagcagtagattttataaaaactttagaaccaaagcccggaagaact
tttagtagtttaagagatgtaaaatatattactccagatgttattgtggaaaaaatagat
aatgagtatataattgtagttaatgatataacggcacctaaactgacaataaataactat
tatagaaaacttttgttaaatagtgaaataggtaataatacttcttcttatataaataga
aaactgaattcagctataaaaatcattaaaagcatacagcagaggagaaatacaatttat
aaagttgttaaagctatagtaaattatcaaaaagaattttttgataaaggaacaatttat
cttaaaccattaacattaagagaaattgcagatgagataggtatgcatgaatcaacagtt
agtagagctgttaatggaaaatatttacaatgtcctagaggaatatttgaattaaaatac
ttttttcaaagtggagtttctaataactatggagatggcatgtctgcagaaagtataaaa
tctataataaaagaattaattgacggtgaagattcaaagaagccattaagtgatcaagct
atttctaatgaattaaacaaaataggtattaaaatatctaggagaactgtagctaagtat
agagatgagatgaagattccttcatcatcaaagagaaaaagatattaa
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