Capnocytophaga sputigena: CGC55_00825
Help
Entry
CGC55_00825 CDS
T05393
Name
(GenBank) restriction endonuclease subunit R
Organism
cspu
Capnocytophaga sputigena
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_2
SNF2-rel_dom
Eco57I
Helicase_C
ResIII
DEAD
Zn_ribbon_DnaG
Toprim
Motif
Other DBs
NCBI-ProteinID:
ATA83130
UniProt:
A0AAX2IEU2
LinkDB
All DBs
Position
188405..194467
Genome browser
AA seq
2020 aa
AA seq
DB search
MATFSPQDIENIVNNTSIVDYFFYLERQGRVKFDRQRGHDYYFLTDNEKFSVDEKGYYDF
KAGKGGQIFKAVMELEKKTWKEAVEFLKDFSNTTISQSVKNQKTENKRPTPTQHYTEKAP
STKITQVTIPNNDKLLEYFAGRGISKEILQQYAQQVHYRNNSDGKNYFGIGLRNQSGGYD
VRNPYVKAKVGASDISIITGTRNEMVVFEGMTDMFSYLQMAKDNGKPNDRTLVVLNSITN
TGTFIEQFQNYTGKIHLFLDGDKAGNDATQNILNNLKNSIDQRGAYGIGKSEVKDLNDYH
LKVFNYKKNIEQSNASEEIKLQKGMKAVNKSTNETFVISYTADNYIDLKREYDSHIAKVN
SVHFHQLSELFNDYDFFDFNNKRLFLSSKNTIFADNNNIQIHTQNGSTTIEPNRVSSSQP
MGEQPLEPNLREPLTPSQSQQEGDNPSRQAMGSDNVGNGLSSSERSYLGRRTGRPQMGSH
NGAQPQILPNQRPLSTEEHQSSGRDIPNGDRSQPQGDGKQLPKESVRPTLLNKPNNTKVS
NEEITTLVNSLTFVADDNTIQLNEGIQITDEIKNTISEYKSGGITKDNRGVLDEYYTDEK
LVNAVRNLIKNNFSGKQSINVLEPSVGTGNFLHATDNLGLKTNVSAFEINETTAKIAKLL
HPEASINLRSFETEFITDKGIKKDFSPQYDLVIGNPPYGNHRGLYLGLGEETKLPRYEDY
FVKRSLDVMNEGATLAMVLPSGWLNRQDKLSGAELSEAYRLPNGVFKATDVGTDIVILRK
NSQAQTQNISNYFKEHPQQILGDTLQRKNRFGREEDYVKGNLDDALTRLQEFTTKKVIQP
EQTQTTREVQLDMFSTFESAPAKEPIAEKEEDVVVTTVPNEEYNNLLVEAKEKVGQAINI
FRNIKFKSLAVITEWDNYAALLRKLDRKNTKFTKEELSDISKKADSIIQEHTPKFKKAQE
ATDIEVVAKSKKQAIENTGEYKVQSTPEISKKTLKYHFVKDDIVVDTALQNSHNITPEQV
KAFTDTNYNGEIANPEIHAQYANYYKGKYIHDFYYAEGDIYEKLERLTVDFAGRLDDEKL
KAQYNKQKSLLQSVLPPKKQLEDIIISPNHEFVHNFDLGKVEKEVYNSYMRRYDMVKVDY
NLADKFKDFVLKLPSQALEPSSSWEVREFVDNQAVTGSDKERNALIRERRKEVANNLFQK
FLREELPNGLKERFVNEFNRKYNNLHIPDYSQFPLFSKINQNFKGKPLELTEVQKAGIGR
LTTKGVGLLAHEVGFGKTLSGVLSMHEAMERGNAKRPLIVVPNDSILKQWVETIFEAIPN
AKVNVLGNLGKDYDLSHFDNKDGEITLVTYEGFQNIGFSDEITQRLAEKFSYINKKDVDS
LENPITGGVSDETMREIEIAIAKKKKMQGIMKRGKVYDWEDFGFDHLTFDEVHNANHIVD
KVRIEDRRFASDFRSQNQRPSKLGLNTWVASQYIQENYDGRNVTLLSATPFTNKPLEYYS
VLSLIANQRLEKSGYFNVNNFFETFMEADNDMEIDAKGDVKFKTNVRRFKNNALFQQLLS
EFIDIKGEEDNPQLVRPNRINKEYKIEQNEFTRKEYDTLNLLFDESEEGAILSHILNARL
IAFSPYLSKNYEGDVDKVSTKDFIENSPKLKTTMDLIRQNKTDKPEAGQIIYSELAVQQF
PRLKEYLVDQVGYKSDEVGIITGATNKNQRLDIQEKFNAGKIKIVIGSEAIQEGMNLQEN
TTDMYLLTLPYNFTSLRQTEGRMWRQGNKWENVRVNYMLTNDSIDVFMLQKLQAKQSRYM
EAIKKGANIIDVSDVDTQELKTAIITNPETRAEIEVELMKKRYENEKTKHAADLGFISRK
FEEYNKVYEVYVNAQKHYKRVKDWAKEEASDYWKEKVPYEQLQVERAKKEIEQVIEKLAK
KGVNIADFQHQQEIVENKIASIDKAINEELPIIRERLITQYKQEKQERLNAPQINFVEER
AEENKTFFKLRPTAENPENKVVENKTSQDEQQRTYKAFKR
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggctacattttcaccacaagatattgaaaatattgtgaataacacttccattgtcgac
tatttcttctaccttgaaagacaaggcagagtgaaatttgaccgccaacgcggacacgac
tactattttcttacggataacgagaaattttcagtagatgaaaaaggctattatgacttt
aaagcgggtaaaggcggtcaaattttcaaagctgtaatggagcttgaaaagaaaacttgg
aaagaagctgttgagtttctgaaagacttttctaatactactattagccaaagtgttaaa
aatcaaaaaacagaaaataaaagacctactcccactcagcattacacagaaaaagccccc
agcactaagattactcaagtgactatacctaacaatgataagttgttagaatacttcgca
gggcgtggtatctcaaaagaaattctacaacaatacgctcaacaggtacattaccgcaat
aatagtgatggtaaaaactattttggtattggtttacgcaatcaatcaggaggttatgat
gtacgtaatccttatgtcaaagccaaagtaggagcaagtgatataagcattataactggt
actcgcaatgaaatggttgtctttgaaggaatgaccgatatgttttcttatctgcaaatg
gctaaagataatggcaaacctaacgaccgtacattggtagtgctaaactctattaccaac
acaggtacttttattgagcaatttcaaaactatacaggtaaaatacatttgtttttagat
ggagataaagcaggtaacgatgctactcaaaacatactcaacaatctgaagaacagcata
gaccaaagaggggcttatggaataggtaaaagtgaagtaaaagacttgaacgactatcat
ttaaaagtttttaactacaagaaaaacatagagcaaagtaatgcctctgaagaaataaaa
ttacaaaaaggaatgaaagcggtaaacaaaagtacgaatgagacttttgtcattagctat
acagctgataattatatagatttgaaacgtgaatacgatagtcatatcgctaaagtaaat
agcgttcattttcatcaactcagtgaacttttcaacgattatgatttttttgattttaac
aataaaagattgtttctttcttcaaaaaacactatctttgccgataataataacatacaa
attcacacacaaaatggaagcactacaattgaacccaatcgagtatcctcatctcagcca
atgggagagcaaccacttgaaccaaaccttagagaacctctcacgccaagccaatcccag
caagaaggagataacccaagccgacaagcaatgggcagcgacaatgttggaaatggactt
agcagctcagagcggagctatttgggaagacgaacaggaagaccccaaatgggcagccac
aacggagcacaaccgcaaattctacctaatcaaagacctctttcaacagaagaacatcaa
agctctggaagagatattccaaacggagaccgatctcaacctcaaggagatggcaaacaa
ttacctaaagaatctgtacgacctacccttttaaacaaacctaacaacacgaaagtcagc
aacgaggaaataacaaccttagtcaattcgctgactttcgttgctgatgataatactatc
caactcaatgaaggtatacaaatcactgatgagataaaaaacaccattagcgaatataaa
agtggcggtattaccaaagataatcgcggggtattagatgaatactacaccgatgaaaag
ttagtgaatgctgtacgcaaccttatcaaaaacaatttctcaggtaagcagtctatcaat
gtattagaacccagtgtaggtacgggtaacttcttgcatgctaccgataatttaggacta
aaaaccaatgtctctgcctttgaaatcaatgaaactactgccaaaatagccaaacttcta
caccccgaagcctctatcaatctacgttcctttgaaacggaatttataaccgataaaggt
attaaaaaagacttttctcctcaatacgatttagtgataggtaaccctccttatggaaac
catagaggactttatttgggtttaggtgaagaaactaaactcccccgctacgaagattat
tttgtaaaacgctcccttgatgtaatgaacgaaggggctactctcgcaatggtacttcct
tcaggttggctcaatagacaggataaactctcaggtgctgaactctctgaggcgtatcgt
ctgcctaacggagttttcaaagccaccgatgtaggtactgatattgtaattcttagaaag
aatagtcaggcgcaaacccaaaatatcagcaactattttaaggaacaccctcaacagata
ttaggtgatactttacagcgcaaaaaccgctttggtcgtgaggaggactacgtgaaaggc
aacttagatgatgcccttacacgcctacaagagtttactaccaaaaaagtcatacaacct
gaacaaactcaaacaacacgagaggtacaacttgatatgttttcaacttttgagagtgct
cctgccaaagaacctattgcagaaaaagaagaagatgttgttgtgactactgtccctaat
gaagagtataacaatttacttgttgaagctaaagaaaaagtaggacaagcaattaatatc
tttaggaatatcaagtttaaatcattagcagtcattactgaatgggataattatgctgcc
ttactgagaaaactcgatagaaaaaatactaaatttaccaaagaagaactttcggatatt
agcaagaaagcggatagcattattcaagagcataccccgaaatttaaaaaggcacaagaa
gcaacggatattgaagttgttgctaaaagcaaaaaacaagccatagaaaatactggtgag
tacaaagtacaatccactccagagattagcaaaaagacactcaaatatcattttgtaaaa
gatgatatcgtggtagatacagctttacagaatagtcataacatcactcctgagcaagta
aaagcctttactgataccaattacaatggcgaaatagccaatcctgaaatacacgcccag
tatgctaattattacaagggaaagtacattcacgatttttactatgccgaaggagatatt
tacgaaaaattagaacgtctaacagttgattttgcaggtagattagatgatgaaaaacta
aaagcacaatataacaaacaaaaatctctcttacaaagcgttttacctcctaaaaaacag
ttagaagatattatcatttcacctaatcacgagtttgtacataattttgatttaggaaaa
gtggagaaagaggtctataacagctatatgaggcgctatgatatggtcaaagtagattat
aatttagcggataagttcaaagactttgttttaaaattaccaagccaagcccttgagccc
tcttcttcttgggaggtcagagaatttgtagacaaccaggcggtaacaggtagtgataaa
gagcgcaatgctttgatacgtgaacgccgtaaagaagtggctaataacctctttcaaaag
tttctacgtgaagaacttcctaatggccttaaagagcgttttgtaaacgagttcaaccgc
aaatacaacaacctccatatacctgactattctcagttccctttgttctctaaaataaac
caaaacttcaaaggcaaacctttagagctaacagaagttcaaaaagcgggtatcggtcgt
cttactaccaaaggagttgggctattagcccacgaagtaggatttggtaaaaccctttca
ggggtactttctatgcacgaggctatggagcgtggcaatgccaaacgtcctcttattgtc
gtacctaatgatagtatcttaaaacagtgggtagaaactatttttgaagctattcctaat
gccaaagtgaatgtattaggcaaccttggtaaagattacgatttgtctcattttgacaat
aaagacggtgaaataaccttagtaacttacgaggggtttcagaatatcggctttagtgat
gaaattacccaacgattggctgaaaaattctcttatatcaacaaaaaggatgttgatagc
ttagaaaatcctattacgggaggtgtttccgatgaaacgatgcgtgagatagaaatagct
attgcaaaaaaaaagaaaatgcagggaataatgaaacgaggcaaggtatacgactgggaa
gattttggttttgaccaccttacttttgatgaagtacacaacgccaaccatatcgtagat
aaggtacgtatcgaggataggcgttttgcctccgatttccgcagtcagaaccaacgccca
tcaaaattgggactcaacacttgggtagcttctcagtatatacaagaaaattacgatggg
cgtaatgttactttactttctgcaactcctttcactaacaagccgttagagtattattct
gtattatcccttattgccaatcagcgattagaaaaatcaggctatttcaatgtaaataac
ttttttgagacctttatggaagccgacaacgatatggaaattgatgccaaaggtgatgta
aagtttaaaaccaatgtacgcaggtttaagaacaacgcgctgtttcaacaacttctatcc
gagtttattgatattaaaggcgaagaggataacccgcaattggtacgccctaaccgtatc
aataaggaatacaagattgaacaaaatgagtttacaagaaaagaatatgacaccctaaac
ctcctttttgacgaaagtgaagaaggggctattctttctcacatcctcaatgcaagactc
atcgctttttctccttacctctctaaaaattacgaaggtgatgtagacaaagtaagtact
aaagattttatagagaactctcccaaactcaaaactacaatggacttaattcgtcagaac
aaaaccgacaagcctgaagcggggcaaatcatctattctgagttggcagtacaacaattt
cctcgtctcaaagagtatttggtagaccaagtaggctacaaatccgatgaagtaggtatc
atcactggggctaccaacaaaaaccaacgtttggatattcaagaaaaattcaatgcgggt
aagataaagatagttattggctcagaagctatccaagagggaatgaacttgcaagaaaac
actaccgatatgtaccttttaacgctaccttacaactttacctctttacgacaaacagag
ggacgaatgtggcgacaaggcaacaaatgggaaaatgtacgtgtgaattatatgctcacc
aacgatagtattgatgtgtttatgctccaaaaactacaagccaagcaatctcgttatatg
gaagctatcaaaaaaggggcaaatatcattgatgtgtctgatgtggatacacaggaactc
aaaactgctatcatcaccaaccccgaaacacgggctgaaattgaagtagagttaatgaaa
aaacgctatgagaatgagaaaaccaaacatgctgccgatttaggttttatctctcgcaaa
tttgaggaatacaacaaagtgtacgaagtatatgtaaacgctcaaaagcactataaaaga
gtaaaagattgggctaaagaagaagcaagtgattattggaaagagaaagtaccttatgaa
caactacaagtagaaagggctaaaaaagaaatcgagcaagtaattgaaaaactggcgaaa
aagggtgtcaatatagccgattttcaacatcagcaagagattgtagaaaataaaatagcc
tctatagacaaagcaatcaatgaggaattaccgattatccgcgaaagacttattacgcag
tacaaacaagaaaagcaagagcgcctcaatgccccgcaaataaactttgtagaagaacgg
gctgaagagaataaaacattctttaaacttcgtccaactgctgaaaatcctgagaataag
gttgtagaaaataaaacatctcaagatgagcagcagcgcacttacaaagcttttaaacga
taa
DBGET
integrated database retrieval system
