Capnocytophaga sputigena: CGC55_01705
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Entry
CGC55_01705 CDS
T05393
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cspu
Capnocytophaga sputigena
Pathway
cspu03030
DNA replication
cspu03430
Mismatch repair
cspu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cspu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC55_01705
03430 Mismatch repair
CGC55_01705
03440 Homologous recombination
CGC55_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cspu03032
]
CGC55_01705
03400 DNA repair and recombination proteins [BR:
cspu03400
]
CGC55_01705
Enzymes [BR:
cspu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC55_01705
DNA replication proteins [BR:
cspu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC55_01705
DNA repair and recombination proteins [BR:
cspu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC55_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ATA83296
UniProt:
A0AAX2I7E3
LinkDB
All DBs
Position
complement(368060..369388)
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AA seq
442 aa
AA seq
DB search
MYAILDIETTGGKYDEEGITEIAIYQFDGHTITDQFISLINPERPIQDYVTKLTGINNKM
LRNAPKFYEIAKRIVEITEGCIIVGHNAAFDYRILQTEFRRLGYEYIKTTLCTVELSQQL
IPDKESYSLGKLVRSLGIPMSERHRASGDAMATLNLFKYLLEKDTKKSIITASVKNDVRL
EMASRHLKILDALPETLGVFYIHNKEGKIIYVGKHKNIKGRVNQLLTSPSKRDRYLQRHT
YKVTYEEMGNELIATLKELELIQLNNPKCNNRSIDKLKNINYILTSHYNKRGYLCFSIEL
LQSQNNFITTFETLKEGLFFLKRIEKEFQLNEVDFNNESPEIYNKRVKEIFAKYGLQNED
VAIVDKGRVVGEKSMILVIDGNIKGYGFLNLNYQLTQRSILETLITPLANSLLNQHLLHS
YLRKNSKVKVLKLSEQKPYHNE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatactcgacatagaaactacgggaggtaaatacgatgaagaaggtattacc
gaaattgctatttatcaatttgatggacatactattaccgatcagtttatctctcttatc
aatcccgaacgccctatacaagactatgttactaaacttacaggcattaacaacaagatg
ttgcgcaatgcaccaaagttttatgagatagccaaacgcatagtggaaattacagagggg
tgtatcatcgttgggcataatgctgcctttgattatcgcattttacaaactgaatttcgc
cgtttagggtatgagtacatcaaaaccacactctgtacagtagaactttcacaacaactc
attcctgataaagaatcgtatagcttaggaaaattagtacgttctttaggtatcccgatg
agtgaacgccatcgtgcttcgggcgatgctatggctaccctcaatctttttaaatattta
cttgaaaaagacactaaaaagagtattataactgcttcagtgaagaatgatgtgcgttta
gaaatggcttcacgacacctaaaaatactcgatgcactccctgaaaccttaggcgtattc
tatatccacaacaaagaaggtaaaattatctatgtaggaaaacataaaaacatcaaagga
cgggtgaaccaattgctcacctctccctctaaacgcgatagatatttgcaacgccatact
tataaggtaacttatgaagaaatgggaaatgaactcattgcaacccttaaagaattagaa
cttatacaacttaacaatcctaaatgcaacaaccggagtattgataaattaaagaatatc
aactatatacttacttctcattacaacaaaagaggatacctctgtttttctatagaattg
ttgcaatcgcaaaacaattttatcactacttttgaaacactaaaagaaggattgtttttt
ttgaagcgcatagaaaaagaatttcaactcaacgaagtagatttcaataacgaatctcct
gaaatatataataaacgagttaaagagatttttgctaaatacggactacaaaatgaagat
gtagcaattgtagataaaggcagagtagtaggtgaaaaaagtatgattttagtaatagat
ggcaatatcaaagggtatggatttttaaatctgaactaccaactcacacaacgttctatt
ttagaaacccttatcactcctttagctaactctttactcaaccaacaccttttacactct
tatctccgcaagaactccaaggtgaaggtactcaaactaagcgaacaaaaaccttatcat
aatgaataa
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