Capnocytophaga sputigena: CGC55_02840
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Entry
CGC55_02840 CDS
T05393
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cspu
Capnocytophaga sputigena
Brite
KEGG Orthology (KO) [BR:
cspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cspu03016
]
CGC55_02840 (truB)
Enzymes [BR:
cspu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CGC55_02840 (truB)
Transfer RNA biogenesis [BR:
cspu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC55_02840 (truB)
Prokaryotic type
CGC55_02840 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TonB_C
Motif
Other DBs
NCBI-ProteinID:
ATA83511
UniProt:
A0AAX2I8K6
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All DBs
Position
592903..594528
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AA seq
541 aa
AA seq
DB search
MITPEEFSEGRVLLIDKPLQWSSFQAVNKIKWAILKHYKLKKIKIGHAGTLDPLASGLLV
ICTGKFTKKITEIQDAVKTYTGTITLGATTPSYDMETEIDARYPTDHITPELIEQVRKQF
MGELVQTPPVFSAIKKDGKRLYEFARDGKEIEVPQRTIYIHNFTIDASQFPKLHFEVMCS
KGTYIRSLANDFGKALGSGGYLSALRRTKIGDLSVSDAISPEEFVTAHIPDLRIKKPPII
LTTVVGEPQEKKVLNDRFANRNKTINSQFEREETPPSHPTGELNMEAIFPRQKARKTSGL
QYELRAFMRMFTNTDKAISITLLILFCTVLTLMVIQLNDKKKEIMIEMALTPDDLPQEPP
QPEETSPNADVPTNNVKLTTNAYNQADASLQHTDDFKTLDEIMAERAAQEMAAAKEELVA
NQKMAGDLIITDHSLQNTTNTPKISDKANKNTLVKYALAGRVGNIPNPVFTCERDGKVVV
SITVDEAGRVTKTAIDRANSTTTDDCLLENSLLYAQKAKFNAVSGKKEQTGTITYIFQSK
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgataactccagaagaattttcagaaggtcgtgttttgcttattgataaacccttacaa
tggtcgtcgtttcaagcggtgaacaaaatcaaatgggctattctcaagcattacaaactc
aagaaaataaaaatagggcatgcgggcacattagacccgcttgcttctggtttattggtg
atttgtactggtaaatttaccaaaaaaatcactgaaatacaagatgctgtaaaaacctac
acgggtactatcaccttaggagcgactaccccttcctacgatatggagaccgaaatagat
gctcgctaccctactgaccatatcactcctgaactgatagaacaagtgcgaaaacagttt
atgggggaacttgtgcaaactcctcctgtattttcggctatcaaaaaagatggcaaacgc
ctctacgaatttgctcgcgatggcaaagaaatagaagtacctcaacgcactatttacatt
cacaatttcactattgatgcaagtcagtttcctaaactgcactttgaggtaatgtgcagt
aagggtacttatatacgttccttagcaaacgactttggcaaagccttagggtcaggaggc
tatctatctgctttgcgacgcactaaaataggtgatctttcagtaagtgatgccataagt
cctgaggagtttgtcactgctcatattcctgacctaagaattaaaaaacctcctattatt
cttactactgtggtaggtgaaccacaagaaaagaaagttctcaacgaccgttttgcaaat
cgcaataaaactatcaacagtcagtttgaacgtgaagaaacgcctccctcccaccctact
ggcgagttgaatatggaggctatatttccaagacaaaaagctcgaaaaacttctggttta
cagtatgaattacgcgcttttatgcgaatgttcactaatactgataaggcaattagtatc
actttgctcatactcttctgtactgtacttactcttatggtaatacaattgaacgacaag
aagaaagaaataatgatagaaatggcacttacccctgatgatttacctcaagagccccca
caacctgaagaaacctctcctaatgccgatgttcctactaacaatgttaaactcactacc
aatgcttacaaccaagctgatgcttccttacaacacactgatgatttcaaaactttagac
gaaattatggctgaacgtgctgctcaggaaatggcagctgctaaagaagaattagtagcc
aaccaaaaaatggcaggcgacctcattatcaccgatcacagtttgcaaaacacaactaat
actcctaaaataagtgacaaagcaaataaaaacactttagtaaaatacgccttagctggt
agagtaggaaatattccgaatcctgtgtttacttgtgaacgtgatggaaaagtggtggta
agtatcactgtggacgaagcagggcgtgtgactaaaacagctattgatagagctaattcc
acaactactgatgattgtttattagaaaactcattactctacgctcaaaaagctaaattc
aatgcggtgagtggcaaaaaagaacaaacaggtactattacttatattttccagagcaaa
agataa
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