Capnocytophaga sputigena: CGC55_05885
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Entry
CGC55_05885 CDS
T05393
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
cspu
Capnocytophaga sputigena
Pathway
cspu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cspu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CGC55_05885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cspu03021
]
CGC55_05885
Transcription machinery [BR:
cspu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CGC55_05885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF6285
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
ATA84064
UniProt:
A0A2A3N5J4
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All DBs
Position
complement(1265798..1266661)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGRVDLITADEEVELAQRIKAGDVAALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYAYLEQANERVPSAEEIARELDMSVNDVKESMKNAGRHI
SMDAPLVEGEDSNLYDVIRSNESPNPDKSLILDSLRTEIERALETLTPREADVIRLYFGL
GDQHAMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactaaaaattaccaaacaggtaaccaaccgtgaaaccgcatctcttgataag
tacttacaagagattgggcgtgtagatttgatcactgccgatgaagaggtagaattagca
caacgtatcaaagcaggcgatgtagctgctttagaaaaactaaccaaagcaaatttgcgc
ttcgtagtatcggtagctaagcaataccaaaaccaaggtcttactcttcctgaccttatc
aacgaagggaacttagggctcatcaaagccgcacagcgattcgacgaaactcgtgggttt
aagtttatttcttatgccgtatggtggattcgtcagtctattttgcaagccttagccgag
caatcgcgtattgtgcgtttgccgctgaacaaaattggttctatcaacaaaatcaacaaa
atgtacgcttacctcgagcaggcgaacgagcgtgtgccttcagccgaagaaattgcacgt
gagttagatatgtccgtaaacgatgtaaaagaatcaatgaaaaatgcggggcgtcatatc
tctatggatgcgcctttggtggaaggagaagattctaatctttacgacgtgattcgcagt
aacgaatcgcctaaccccgataagtcgcttattttagattcgttacgtaccgagattgag
cgcgcgctcgaaacccttacccctcgtgaagctgatgtaattcgtttgtactttggcttg
ggcgaccagcacgctatgacccttgaggaaataggagaaacttttgatcttacccgtgag
cgtgtacgtcaaatcaaagaaaaagcgattcgccgtctcaaacatacttcacgcagtaaa
attctaaaaacttacttaggatag
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