Capnocytophaga sputigena: CGC55_10380
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Entry
CGC55_10380 CDS
T05393
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cspu
Capnocytophaga sputigena
Brite
KEGG Orthology (KO) [BR:
cspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cspu03009
]
CGC55_10380 (rimO)
Enzymes [BR:
cspu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CGC55_10380 (rimO)
Ribosome biogenesis [BR:
cspu03009
]
Prokaryotic type
ribosomal protein modification factors
CGC55_10380 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
CCDC22_CC
Motif
Other DBs
NCBI-ProteinID:
ATA84880
LinkDB
All DBs
Position
complement(2192352..2193662)
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AA seq
436 aa
AA seq
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MRTRSIKKNTINVVTLGCSKNVYDSEVLMGQLKAGGKEVVHEKEGNIVVINTCGFINNAK
EESINTILDYVQQKEAGLVDKVFVMGCLSERYKPDLEKEIPDVDQYFGTSELPALLKVLG
ADYKHELIGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGAHISTSIKDLVTEAEKLA
AKGVKELILIAQDITYYGLDLYKKRALADLLRALVKVEGIEWIRIHYAFPTGFPMDVLEV
MKAEPKICNYLDIPLQHISDKILTSMKRGTTQEKTTKLLKKFREAVPEMAIRTTLIVGYP
GETEEDFQALKEFVKAMRFDRLGCFTYSHEENTTAYELADDVPEEVKLQRANEIMELQSQ
ISWELNQAKVGKVFRCLIDRKEGNYFVGRTEYDSPDVDNEVLIDAKKHYVKIGDFTDVKI
IEAADYDLYGEPITNC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaagatcaataaaaaagaatactatcaatgtggtaacccttggttgctctaaa
aacgtgtatgacagcgaagtgctaatgggacagttaaaggctggtggcaaggaagtagta
cacgaaaaagaaggtaacatagtggttatcaacacttgcgggtttatcaacaacgccaaa
gaagagagcatcaacaccatattagactatgtgcagcaaaaagaagcaggattagtggat
aaagtctttgtaatgggctgcctttccgaacgctataaaccagatttagaaaaagaaatc
cccgatgttgatcaatattttggcactagcgaattacctgctctactcaaagttctcggc
gccgactataaacacgaactcataggcgaacgactcactactacacctaaaaattacgcc
tatcttaaaatatccgaaggatgcgaccgcccttgtagtttttgtgctattccactaatg
cgtggcgctcatatctctacctccattaaggatttggtaaccgaagccgaaaaactcgct
gccaaaggtgtaaaagaactcattctcatcgctcaggatatcacctattacggcttagac
ctatacaaaaaacgcgctcttgccgacctattgcgcgccttggtaaaagttgaagggatt
gagtggatacgcattcactacgccttccccacaggtttcccaatggacgtgcttgaagtg
atgaaagccgaacctaagatatgtaattatttagatatcccactacagcatatttccgat
aagattctcaccagtatgaaacgcggcaccacccaagagaagaccaccaagctcctcaaa
aaattccgcgaggcagtccccgaaatggcaatacgcaccacattgattgtaggttaccct
ggcgaaaccgaagaagattttcaggcacttaaagaatttgttaaagcaatgcgttttgat
cgcctcggttgttttacctatagccacgaagagaatactacagcctatgagttagccgac
gatgtacctgaagaagtaaagctacaacgtgccaatgaaattatggaattgcaatcgcaa
atatcgtgggaattgaaccaagcgaaagtaggaaaagtctttcgttgcctcatcgaccgc
aaagaaggcaattactttgtagggcgcaccgaatatgattcccccgatgtagacaacgag
gtactcatcgacgctaaaaaacactatgtgaaaataggcgattttactgatgttaaaatt
atagaggctgcagattacgatttgtatggagaacccattacaaattgttaa
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