Capnocytophaga sputigena: CGC55_11540
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Entry
CGC55_11540 CDS
T05393
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cspu
Capnocytophaga sputigena
Brite
KEGG Orthology (KO) [BR:
cspu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cspu03400
]
CGC55_11540
DNA repair and recombination proteins [BR:
cspu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CGC55_11540
Archaeal homologous recombinant proteins
CGC55_11540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Relaxase_C
Nop
Motif
Other DBs
NCBI-ProteinID:
ATA85081
UniProt:
A0A250FJ65
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Position
complement(2452196..2453419)
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AA seq
407 aa
AA seq
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MNFLHTADWHLGQTFYQYDRYEEHQHFLDTLLQILETENTEVLLISGDVFDIANPSVAAT
KQFYHFLHQATERFPYLQIITIAGNHDSPVRLEMPLPLLENTQVQLIGHIRRNEIREIDY
DALILPLYSKGEIAAYCLAVPFLRLGDTPKTDDFSDYSKGIASFYQEITERALAIANGKP
LIAMGHLHALGAELSEDDTAERPIIGGMESVQPSSFPKALKYVALGHIHKAQFLGNAHIR
YAGSPIPLSFSEKHYIHQVVSFSIENGQVQGIKSIPLPIHTPLLSVPERALPPEEVLHLL
AALPEVTSKSIAPYLEVKVLLKEPAPELKNSILKTIANKHVRLARIDVRYQQQNKAKQTV
LQSELTLNDLQPYEVLQHVYENKYHEPLPDFYKPLFEEAMGLVESEK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaattttctacatactgccgattggcatttaggacaaacattttaccaatacgatcgc
tatgaagagcatcaacacttcttggacactctcttgcaaattctggaaactgaaaacact
gaggtgcttcttatcagtggtgatgtattcgatattgctaatccctcggtagctgctact
aaacaattctatcactttttacaccaagctactgaacgtttcccctacttacaaatcatc
actattgcaggtaaccacgattctcccgtgcggcttgaaatgcccttacctctcttagaa
aatactcaagtacaattaataggtcatattaggcgaaacgaaattcgcgaaattgactac
gatgcccttatccttcctctttacagcaaaggcgagattgctgcctattgtctcgctgta
ccttttctgcgtttaggcgacacacctaaaactgatgatttttcggattacagcaaggga
attgcctctttctaccaagaaattaccgaaagagctttggctattgctaacggtaaacca
ctgattgctatggggcatttgcacgccttaggggctgaactcagtgaagatgacactgcc
gagcgtcctatcattgggggaatggagagcgtacagccttcaagtttcccaaaagcactg
aaatacgtcgctttagggcatatccacaaagctcaattcttaggcaatgcccatatacgt
tatgcagggagtcctatacccctttcattttccgaaaaacactatattcatcaagtagta
agtttctccatagaaaacggacaagtacagggcatcaaatctattcctttacctatccac
acccctttgctcagtgtgcctgagcgggcacttcctcctgaggaggtgttacatcttctc
gctgctttacccgaagtaacaagtaagagtatagcgccttatttagaagtgaaagtactg
ctcaaagagcccgctcccgaactgaagaacagcattctaaaaactattgctaacaagcac
gtgcgtttagcgcgtattgatgtgcgctaccaacaacaaaacaaagctaaacaaacagtt
ctacaaagtgaacttaccctcaacgacttacagccttatgaggtattacagcacgtatac
gaaaacaaataccacgaacctctacccgatttttacaaacccttatttgaggaggcgatg
ggattagtggaaagtgaaaaatga
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