Capnocytophaga sputigena: CGC55_12300
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Entry
CGC55_12300 CDS
T05393
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
cspu
Capnocytophaga sputigena
Brite
KEGG Orthology (KO) [BR:
cspu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cspu02000
]
CGC55_12300
Transporters [BR:
cspu02000
]
Other transporters
Pores ion channels [TC:
1
]
CGC55_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
TonB_dep_Rec_b-barrel
CarboxypepD_reg
Big_1
CooC_C
Motif
Other DBs
NCBI-ProteinID:
ATA85229
UniProt:
A0AAX2I960
LinkDB
All DBs
Position
complement(2652278..2655343)
Genome browser
AA seq
1021 aa
AA seq
DB search
MKNIISICILLFSIPMLAQKVTITGVVTDENQQPLPGATVVVEPAHTGTATDLDGRFSLN
VLSTDKIVVSYIGYQPKTIAVGKTRTFKVTLSPEVTQMDEVVIVGYGTQRKSDISTAVAS
VKMADIAQSSPSQVLQALQGKVSGVQIISSDGSASSGLTFRIRGVNSITGGTQPLFVIDG
VPMPTQRVTNTNDDVATNPLLGLNPNDIESMEILKDAAAAAIYGSNGSNGVVLITTKKGK
ELAKPKFNFSYASSIEMMPNIPLKVLSAEDYAHKMLDYGTWGNQPQIDFWQRMIAEKGWN
HPAVKNWLKEVTQTGTKNEANGSIMGGTDQTRYMLSVGYLSQKGLIKRSAFNRFTSRLNL
SQKINDKMNAGINLSYAVSKDKNPVSDWSQNGVVLRALQTSPFLDYPGFGTLMSYPNIRT
MSPKVAVDQVDINTKYNELNANVYLSYQLLKDLSFNTSASYRLHTIGQDRFWGPDTWFGQ
SERGRMELSNRNENSWVYEARLQYSKSINKHYFSIMGAFEANKYWTDYTYNKSTNFEDTK
QGIWGINQGLVTYAPLYTYDGNQLVSYISRATYSYNNKYVLNASLRADGSSKFGKNNKYG
YFPAISLAWNAHEEDFIKKIEAISNLRLRGSFGMTGNNQIPSYQSLAQLAKNKVVLDGNK
VEIGRYTSNIANDNLKWESQKQYNIGLDLSFLKNRYTFSTELYYKRIDDMLLEVNIPSTS
GFQKAWKNAGSMENKGLEVSFNAQWLRDGDFKWTTDFNISFYRNKILSLDEGQYQQFYDR
GINSKIKSDVLLRVGMPVGIYYGYVADGVFHNQNEVDNAQPGPNVALGGLRVKDINHDGV
IDTNDRVPVADVNPLHTGGIGNTFSYKGWELYAFLRWSYGNDVVNGNAYYLTGTKNIDNI
TQSVYNNVWSEAHPDRNFPLFGGGFWAENAFRSDLVEDGSFLRLQTVSLSYNLPKEVLEP
YKLNKLRIGVTGTNLALWTRYSGFDPEANTGYGTIARLAPGLDMSPYPRPTSVLFSVEVG
F
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatcattagcatttgtattttgttgttcagcatcccgatgttggcacaaaaa
gtaaccattacgggggtcgttactgatgaaaaccaacaaccccttcctggtgcgacggta
gtagtagagccagcgcacacaggtacggctactgatttggatgggcgtttttccttgaat
gtactctctactgataaaattgtagtgagctatatagggtatcagccaaaaaccatagcc
gtaggcaaaacgcgtaccttcaaagtaactctctctcctgaagtaactcaaatggatgag
gtggtaatcgtagggtacggtactcaacgcaaaagcgatatttctacggcagtagcttcg
gtgaaaatggcagatatcgcccaaagcagtccgtctcaggtattgcaagcgttgcaaggc
aaagtgagtggggtgcaaatcatctcttccgatggttctgcttccagcggactcaccttt
agaattcgcggggtgaactccatcacaggaggtacacaaccgctatttgttatcgatggg
gtgccaatgcctactcaaagggtaaccaataccaatgatgatgtggctaccaacccattg
ctcggtttgaaccctaatgacattgagtcgatggaaatcctcaaagatgccgccgcagca
gctatctacgggtctaatggttctaatggggtagtacttatcaccaccaaaaaaggcaaa
gaactcgctaaacctaaatttaacttcagttatgcaagttctattgaaatgatgcctaat
atccctttgaaggtgctcagcgctgaagattacgctcacaaaatgctcgactatggcact
tggggcaaccaacctcaaatagacttttggcaacgaatgattgctgaaaaaggctggaat
caccctgctgtgaaaaattggttgaaagaagttacccaaacaggtactaaaaatgaagct
aacggtagcattatggggggtaccgaccaaacccgttatatgctttctgtgggctatctc
agccaaaaaggacttatcaagcgttctgctttcaaccgctttacttcacgcctcaacctc
tcacaaaagattaacgacaagatgaatgcaggtatcaacctttcgtatgccgtttctaaa
gataaaaatcctgtgagtgattggtctcaaaatggagtggtactcagggctttgcaaact
tctcctttcttagactaccctggttttggcaccctgatgagctatcctaacattcgcaca
atgagccctaaggtagcagtagaccaagtggatatcaataccaaatacaacgagctcaac
gccaatgtatacctcagttatcaactgctcaaagatttgagttttaacaccagcgcttct
taccgcttgcacactattggtcaagaccgtttttggggtcctgatacttggtttggacaa
tcagaacgcggacgtatggaactctctaatcgcaatgagaacagctgggtatacgaagct
cgcttgcagtactctaaaagcatcaataagcactatttttctataatgggcgcttttgaa
gccaataagtattggacagattatacttataacaaatctaccaacttcgaggataccaaa
caaggtatttggggtatcaaccaagggttagtaacctatgcgcctttgtacacttatgat
ggcaaccaattagtatcctacatcagtagagcaacttatagttataacaacaagtatgtg
ctcaatgcttctttgcgtgctgatggttcttctaaatttggtaagaataacaaatacggt
tatttccctgctatttctttagcttggaatgctcacgaagaagactttatcaaaaaaata
gaagctatttccaatttgcgtttgcgcggtagttttggtatgacaggtaacaaccaaatc
ccatcttaccaatctttagcgcaactcgctaaaaataaagtagttttagacggtaacaaa
gtggaaatcggtcgttataccagcaatattgctaacgataacctcaaatgggaaagccaa
aagcaatataatatcggtttagatttgtccttcctcaaaaaccgctacaccttttctacc
gaattgtactacaaacgcatagacgatatgcttttagaagtgaatatcccttctacttca
ggattccaaaaagcgtggaagaatgcaggttcaatggaaaacaaaggtctcgaagtaagt
ttcaatgcacaatggttgcgtgatggcgatttcaaatggacaactgatttcaatatttct
ttctaccgaaacaaaatcctttcattagacgaaggtcagtatcaacagttttacgaccgt
ggcatcaactccaaaatcaaaagtgatgtgcttttgcgcgtaggtatgccagtgggtatt
tactatggttatgtagccgatggtgtattccacaaccaaaacgaagtggacaatgcacaa
ccaggtcctaacgtagctttaggaggtttgcgagtgaaagacatcaaccacgatggtgta
atcgatactaacgaccgtgtgccagtagccgatgtaaacccattacatacagggggtata
ggcaacactttctcctataaaggctgggaattatacgctttcttgcgctggtcgtatggc
aacgatgtagtaaatggtaacgcttactacctcactggcactaagaatatcgacaatatc
acacaaagtgtttataacaacgtgtggtcggaagctcaccccgaccgcaacttcccactc
tttggaggtggtttctgggctgaaaacgctttccgcagcgacttggtagaagatggttca
ttcttgcgtttgcaaaccgtgagtctcagctacaatttgcctaaggaggtattagagcct
tataaactcaacaaattgcgcataggggtaacaggtactaacctcgctctttggacacgt
tattcagggtttgacccagaagctaatacaggttatggcaccatagctcgtttggcacca
gggcttgatatgagtccatacccacgacctacctcggttttattctcagtagaagttggt
ttttaa
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