Clostridium scatologenes: CSCA_0005
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Entry
CSCA_0005 CDS
T03803
Name
(GenBank) transcriptional regulator, LacI family
KO
K26609
LacI family transcriptional regulator, galacturonate utilization repressor
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csq03000
]
CSCA_0005
Transcription factors [BR:
csq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CSCA_0005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_38
HTH_Tnp_ISL3
HTH_3
MarR_2
HTH_10
HTH_7
HTH_Crp_2
Intron_maturas2
Phage_terminase
TnsD
Motif
Other DBs
NCBI-ProteinID:
AKA67130
UniProt:
A0A0E3JWE4
LinkDB
All DBs
Position
6025..7035
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AA seq
336 aa
AA seq
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MSVTIKDIAKLANVSHTTVSRALNNSPLINEETKSKIKAIAEKLNYVPNYIAKSLVLDKS
YTIGLFFSSISRGTSSGFFFETVTGVNSAIEENYNLVVRGIDNYKDFTAINKKRFDGIVL
MSQSDNDNYFVYDIMQKGIPLVVLNRELEEESLVNIISDDKEGTFKAVEHLIKNGHKDIA
IIEGKKEFKSTQNRKNGFMEALIHYNIPVRKEYIVKGNFDMKSGYSAMNKLINLDKVPTA
VFCSNDDMAIGAIKAAFDNGLSVPKDISIVGFDDIAVSEYSTPSLTTVKRPIEDISIMGG
KKIIDIINGESNKGEKIFLKTKLVIRDSVLKLNENN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaacaataaaagacatagcaaaattagcaaatgtgtcacatacaacagtttca
agagcacttaataatagtcctttaataaatgaagaaacaaaaagtaaaataaaagctata
gcagaaaaacttaattatgtgcctaattatattgcaaaaagcttagtgttagataaatct
tatactatagggttatttttctccagcataagtagaggtacatcctcaggatttttcttt
gaaacagtaacaggagtaaatagtgctatagaagaaaattataatttagttgtaagaggg
attgataactataaggattttacagctattaataaaaagagatttgatggaatagtttta
atgagtcaaagtgacaatgataattactttgtatatgatataatgcaaaaagggattcca
ctagtagttttaaatagagaattagaagaggaatctttagtaaatataatatctgatgat
aaggaaggtacttttaaagctgtagagcatttgataaaaaatgggcataaagatatagca
ataatagaaggaaaaaaggaatttaaatctactcaaaacaggaaaaatggatttatggaa
gctttgattcactataacataccagtacgtaaagaatatattgttaaaggaaattttgat
atgaaaagtggatattctgctatgaataagcttataaatttagataaagttcctacagca
gtattttgttctaatgacgatatggcaataggggctataaaagcagcttttgataatggc
cttagtgttccgaaagatatttcaatagtaggatttgatgatatagcagtttcagaatat
tctacgccatcacttacaactgtgaaaagaccaatagaagacataagtataatgggtgga
aagaagataatcgatataataaatggagaaagtaataaaggtgaaaaaatttttcttaag
actaaacttgtgataagagattctgttcttaaactaaatgaaaataactaa
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