Clostridium scatologenes: CSCA_1142
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Entry
CSCA_1142 CDS
T03803
Name
(GenBank) extracellular solute-binding family protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
csq
Clostridium scatologenes
Pathway
csq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSCA_1142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csq02000
]
CSCA_1142
Transporters [BR:
csq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CSCA_1142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AKA68267
UniProt:
A0A0E3JMP8
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All DBs
Position
1243481..1244713
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AA seq
410 aa
AA seq
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MRKILALFMIFMLSIGSFGCAQKKNPADDTMNKNWDTILKEVKGTTVNFYGWGGSKTTNA
WIDDYLTKMLKDKYDITLKRVPMNIEDILNKLIGDKQANNKKGTIDVVWINGENFYTAKQ
AGILYGPFAEKLPNFNKYIDKNSIEVKSDFGYSVEGYEVPYGKAQFVMVYNGSKLSKTPA
SAQELLQFVKEHPGKFTYSAPPDFTGSAFVRNIIYDTVGYDKIANAKPDKQSVEKVIQPA
MDYLKQLKSYLWNNGKAYPSTIAQLDNMYADNQLLMSMSYNPNSIPGKVKSGEYPKGTKS
FIFNKGTIGNTHFLAIPYNAPNKSGAMAVINAIITVEAQASKYDPEGWGDLPVLDNSKLS
ADEKKKFEEIKVGEGVIPQDKLLSHRIPEVPAQLVPIIEKIWLEQIPGDK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaagatattggcattatttatgatttttatgttatcaataggttcctttggatgt
gctcaaaagaaaaatccagctgacgatacaatgaataaaaattgggataccatattaaaa
gaagttaaaggaacaactgttaatttttatggctggggtggaagtaaaacaacaaatgcg
tggatagatgactatttaactaaaatgttaaaggataaatatgatataaccttaaaaaga
gtccctatgaatattgaggacatattaaataagttaattggagataaacaggcaaataat
aaaaaaggaactattgatgtagtttggattaatggagaaaatttttatacagcaaagcaa
gcaggaatactttatggaccttttgcagaaaagctgcctaattttaataaatatatagat
aagaattcaatagaagtaaaatctgattttggatattctgtggaaggatatgaagtacct
tatgggaaagcacaatttgtgatggtgtataatggaagtaagctgtcgaagacacctgca
agtgcacaggaattattacaatttgtaaaagaacatccaggaaaatttacatattctgca
cctcctgattttactggaagtgcttttgtaagaaacattatatatgatactgttggatat
gataagatagctaatgcaaaaccagataaacaatcagtagagaaagtaattcaaccagct
atggattatttaaagcaattaaagtcttatttgtggaataacggcaaagcttatccatct
accatagctcaattagataatatgtatgcagataatcagttgcttatgagtatgtcttat
aatccaaattcaatacctggtaaggtaaagagtggtgagtatccaaaaggtacaaaaagt
tttatatttaataagggaactataggaaatacccactttttagcaataccatataatgca
cctaataagtcaggagcaatggctgttataaatgcaataattactgttgaagcacaagca
tcaaaatatgacccagaaggttggggagatttaccagttttagacaacagtaaactttca
gcagatgaaaagaagaaatttgaagaaattaaggttggagaaggagtaatacctcaggat
aaattattgagtcacagaattcctgaagttccagcacagttggtacctattatagaaaag
atttggttagaacaaattccaggagataagtaa
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