Clostridium scatologenes: CSCA_1350
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Entry
CSCA_1350 CDS
T03803
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_1350
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CSCA_1350
Archaeal homologous recombinant proteins
CSCA_1350
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Med16_N
Epimerase_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
AKA68475
UniProt:
A0A0E3M879
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Position
1486654..1487817
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AA seq
387 aa
AA seq
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MKIIHTGDWHIGKMVHQVQMIEDQDYILKEFIKLIEEEKPDVVVIAGDLYDRSVPPVVAV
DLLDRVFTKILVNLNTPIIAIAGNHDSGDRVGFASQILKNKGLYICGRLGKNISPIVIKD
QYGEVNFYPVPYADPAEVRHVMEDEDIHNHNEAMKSIIDSIKENMNESKRNVLIAHGFVI
GAGERDTCESERPLSIGGTEFIDIENFNVFNYTALGHLHGAQKVGCDKVRYSGSLLKYSF
SEFKQKKSITIVNLNKDGEVSIDLRSLIPHKDMRIIKGKIEDLLNPDVYRNTNVNDYIYV
DLTDECEIIEPMSKLRTVYPNVLKLTRNSFNRKMENGRTSLQEDYNNKTMLELFDEFYTN
VIGREFTKEKKDVLLKVLKSVEKKEGR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagataattcatacaggtgattggcatataggtaaaatggtacatcaggtgcaaatg
attgaagatcaagattatatcttaaaagagtttataaaattaattgaagaggaaaaacca
gatgttgtagttattgcaggagatttatatgatagatcagttcctccagttgtggcagta
gatcttttagatagagtttttaccaaaatacttgttaatttaaatacacctataattgcc
attgcaggtaatcatgacagtggagatagagtagggtttgctagccaaattttgaaaaat
aaaggtttatatatttgtggaaggttaggaaaaaatattagcccaatagttataaaagat
caatatggagaagttaatttttacccagttccttatgcagatccagcagaagtgaggcat
gtaatggaagatgaggatatacataaccataatgaagctatgaaaagcataatagattct
ataaaagaaaatatgaatgaaagtaaaaggaatgttttgatagcccatggttttgtaata
ggggcaggtgaaagggatacttgtgaatctgaaaggccactttctatagggggaacagaa
tttatagatatagaaaattttaatgtttttaattatactgcattaggacatttacatggt
gctcaaaaggtaggatgtgataaggttagatattctggttcattacttaaatattctttt
tcagaatttaaacaaaaaaaatctattactatagttaatttaaataaagatggagaagta
agtatagaccttaggagtcttattcctcataaggatatgaggattataaaaggaaaaata
gaagacttattaaatcctgatgtttatagaaatacaaatgttaatgattatatttatgta
gatttaactgatgaatgtgaaattatagaacccatgagtaaacttagaacagtttatcct
aatgtgcttaagcttacaagaaattcttttaatagaaaaatggaaaatggaagaacgtcc
ttacaggaagattataataataaaacaatgttagaactttttgatgaattttatacaaac
gtaataggaagagagtttacaaaggagaaaaaagatgttttattaaaagtattaaaaagt
gtagaaaagaaagaagggaggtaa
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