Clostridium scatologenes: CSCA_1351
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Entry
CSCA_1351 CDS
T03803
Name
(GenBank) putative DNA-directed RNA polymerase, omega subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_1351
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CSCA_1351
Archaeal homologous recombinant proteins
CSCA_1351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
T2SSE
HypA
SMC_N
AAA_22
AAA_30
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKA68476
UniProt:
A0A0E3GQF4
LinkDB
All DBs
Position
1487822..1490974
Genome browser
AA seq
1050 aa
AA seq
DB search
MRPLKLTMTAFGPYAKKQEIDFTNLNGRNIFLITGPTGAGKTTIFDGISYAIYGEASGED
RDSESLRSQFADIDTLTSVELEFNLRGVDYYIKRIPKQEKKKARGEGLTEQKTDAEMKIF
KNNGDINVISGVSNVNEYINEIMGINYEQFKQIMMIPQGEFRKLLTSESKDREKILQKIF
GTEAYKLVEIKLNEMAGKIRRSVNELEHKQNEIIGTVQCNDNAALVELVESENKNVSSII
EELKTYIKSDNERKNIIEKSISKKEKFLEEKQKEILEAKENNKKFKEKDAIEIQKKFLED
KESTIEEKKTILLKARKAGEIVGVEENCIEKEKRLESKKLELLEKQESIKLDAENLKKAE
ESFKFESSREEERKKLLEDTAILKGYISKVKDFENKSESLKILDKNLKLIEQDKLLKKQE
IEKLKKDIDNYNNELELARKSSEEFVKLNAQLEKVNEIYSKIHTLDLENKKLVKIRGDYL
KYRNKAVEDKKILEAAELNFKELERLFREGQAGLLAKNLEDGMLCPVCGAIHHPKLALLE
KGVPTEAELKIKKDYLDEALKKFQSSNESFIEADVKGRSQNSIVNRLKEELQSLIEDDIV
TLTKDELTNFIKEKLLYFEENRKSLGIETQRLEKEKNNRDNLLKLLNEKKDLQSKLEKSF
EELNNKYQLSLSAVEREKGTLKQIEQEIPEKFRGEKNLINAITGMEYKQTAMEKALKESQ
EKFNNLKLKYEKLIIEKEGIIKALKEEEISLNDSENKLNEGITKRGFKDLQDYKKSKLTE
SKQEELNKYINDFNEELKSIKDRYIKIQKDIEGKSLVNVNTLENDYEIIKKERELLDNQK
VALHAKIEINSNAFLRIRELNKEIKDREKEYSIVGDLSEAAKGNNSERMTFERYVLAFFF
DNIIEAANIRFSKMSENRYELDRIKQKGKGLTQSGLELQVYDNYTGKYRHVKTLSGGEGF
KASLSLALGLSDVVQCYSGGISLDTMFIDEGFGTLDPESLENAIQCLVDLQNTGRLVGII
SHVPELKERIDARLEIMPSAEGSTAKFNIL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagacctttaaaattgactatgacggcttttggtccttatgctaagaaacaagaaata
gattttacaaatctaaatggaagaaatatatttttaataacaggaccaacaggagcaggt
aaaactacaattttcgatggtataagttatgctatatatggagaagccagtggggaagat
agggattcagagagtttaagaagtcaatttgcagatattgacacattaacatctgtggaa
ttggagtttaaccttagaggagtagattattacataaaaagaataccaaaacaggaaaag
aaaaaggctaggggagaaggattaacagaacagaaaacagatgctgaaatgaagatattt
aaaaataatggtgatattaatgtgatttcaggggtaagtaatgtaaatgaatatataaat
gaaattatgggaataaattatgaacaatttaaacaaattatgatgatacctcagggagaa
tttagaaagcttttaacttctgaaagtaaggatagagaaaaaatacttcaaaaaattttt
ggaacagaagcatataaattagtggaaataaaacttaatgaaatggctggaaaaattaga
agaagcgttaatgaactagagcataagcaaaatgaaatcataggtactgtgcagtgtaat
gataatgcagcattagttgaattagtggaaagtgagaataaaaatgtatcttctattata
gaggaattaaagacgtatattaaaagcgataatgaaagaaaaaatattattgaaaagtct
ataagtaaaaaggaaaagtttttagaagaaaaacaaaaagaaattttagaagccaaagaa
aataacaaaaagtttaaagaaaaagatgctatagaaattcagaaaaagtttttagaagat
aaagaaagtaccatagaagaaaagaaaactatacttttaaaggctagaaaagctggtgaa
atagtaggtgtagaagaaaattgtattgaaaaggagaaaagattagagtcaaaaaaacta
gaacttttagaaaagcaagagtctataaagttagatgcagaaaatttaaagaaggcagaa
gaaagttttaaatttgaaagttctagggaagaggaaagaaaaaaacttttagaagatacc
gctatattaaaaggatatataagtaaagttaaggattttgaaaacaaatcagaaagtttg
aagattttagataagaacttaaagttaatagaacaagataaacttttaaaaaaacaagaa
atagaaaagttaaagaaggatatagataactataataatgaattagaattagctagaaaa
tcatcagaagagtttgtaaaattaaatgcacagcttgaaaaagttaatgaaatatatagt
aaaattcatactttggatttagagaataaaaaacttgtaaaaattagaggcgattattta
aaatatagaaataaggccgtagaggataaaaaaatattagaagcagcagaacttaatttt
aaagaattagaacgactttttagagaaggtcaagcaggtcttttagcaaaaaatttagag
gatggaatgctatgtcctgtttgcggagcaattcaccatcctaaattagcactactcgag
aaaggtgtacccacagaggctgagctaaagataaagaaagattatttagatgaagcatta
aaaaagtttcaaagtagtaatgaaagttttatagaagcggatgttaaggggagatctcaa
aacagtattgtaaatagattgaaagaggaacttcaatcattaatagaggacgatatagtc
acacttacaaaagatgaattaactaattttataaaggaaaaacttttatactttgaagaa
aatagaaaaagtttaggcatagaaacacaaaggttggaaaaagaaaaaaataatcgtgat
aatttgctgaaacttttgaatgaaaaaaaagatttacaatcgaaattagaaaaaagtttc
gaggaattaaataataaatatcaattgagtttaagtgcagttgagagagagaaaggtaca
ttaaagcaaatagaacaagaaatacctgaaaagtttcgtggagaaaaaaatttaataaat
gctataacaggaatggaatataagcagactgctatggaaaaagcattaaaagagtcacag
gaaaaatttaataatttaaaacttaagtatgaaaaacttattatagaaaaagaagggata
ataaaagctttaaaagaagaagaaatttctctaaatgattcagaaaacaaattaaatgaa
ggaataactaaaagaggctttaaagatttacaggattataagaaatcaaaacttacagaa
agtaaacaagaggaattaaataagtatataaatgattttaatgaggaattaaagtccata
aaagataggtatataaaaatacagaaggatatagaagggaaaagtttagttaatgtaaat
actcttgaaaatgattatgaaattataaagaaagaaagagaattactagataatcaaaag
gtagcacttcatgcaaagatagaaataaatagtaatgcatttttacgtatacgagaatta
aataaagaaattaaagatagagaaaaagagtacagcatagttggagatttgtcagaagct
gcaaaaggtaataatagcgaaaggatgacttttgagagatatgtattggctttctttttt
gataatattatagaagcggccaatataagattttcaaaaatgagtgaaaatagatatgaa
ttagatagaattaaacaaaagggtaagggactaactcaaagtggacttgaacttcaagta
tatgataattacacaggaaaatataggcatgtaaaaacgctgtcaggcggagaaggtttt
aaggcatcattatcattagcattaggtttatcggatgtagttcaatgttattctggaggt
ataagtttagatacaatgtttattgatgaaggatttggtactttagatcctgaatcttta
gaaaatgctatacagtgtcttgtggatctacaaaatacaggaaggcttgtaggtataata
tctcatgttcctgaacttaaagagagaattgatgcgagacttgaaataatgcctagtgca
gaaggaagtactgctaaatttaatatattgtag
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