Clostridium scatologenes: CSCA_1493
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Entry
CSCA_1493 CDS
T03803
Name
(GenBank) superfamily I DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq03420
Nucleotide excision repair
csq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSCA_1493
03430 Mismatch repair
CSCA_1493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_1493
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSCA_1493
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSCA_1493
MMR (mismatch excision repair)
Other MMR factors
CSCA_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
DEAD
PhoH
SLFN-g3_helicase
AAA_11
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
AKA68618
UniProt:
A0A0E3JY65
LinkDB
All DBs
Position
complement(1607089..1609380)
Genome browser
AA seq
763 aa
AA seq
DB search
MALNDEDIILEKNNLNEMEDWIHNEEIKIKENDDELKKRIDGLRKQSKGKYNEELETKEK
LYKITHKNLEKYNEAKSQPYFGRIDFREYKRDNEIFYIGKFGLMDMTTGDEKVIDWRSPI
ADLYYSGTYGEVFYRAPMGIISGELSLKRKFLIKEGKLINAFDEGINEIILRSAGGGENV
LMDEYLKINLEQSVSNKLKDVVATIQKEQNDIIRAEKNTALIVQGSAGSGKTTVALHRLA
YLIYKYNGKLKGEDILVVAPNKLFLDYISEVLPDLGINTVKQITFEEIALEVLKLKGKLI
TKDKKLSDILEVKDSENLKYMTKSSSIKGTMEYKLLMDKYIEYVELKDLDIEDIKVESYL
LFDKKEIKRLYSKDMVNLSLNNRKDEIKRYFTLKIDEKIRNVLDKIDFSYEYMVARVKKT
TEDGPLRRKRLIGLYDERDNKKVQIKQASIKNFEDYFNKWKITDTKRFYFDLFNKEELFN
EVIKDKIPKKLALYMKNELSYNFENDIFDSDDLAAMMYLKFKIEGVPEKYKYKHIVIDEA
QDYSMFQIAVINEMVSNSSLTIVGDIGQGIYYYKGIERWEGLVEEVFKNKSTYVQLTQSY
RSTIEIIEFANRILKKQRNKLKPAMPVLRHGKSPEIIEFNNNREFAEKLDSIVEEVKAMD
KKSIAVIGKTYEECKKIKEHLKKYSNYKWELVKETDKNLKLEKIIVPSYMTKGLEFDCSI
IYNCNKDNYKDNELDKKILYVCLTRALHLQYVFYNKSISKLIE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaatgatgaagatattatattggaaaaaaataatttaaatgaaatggaagat
tggatccataatgaagaaataaaaattaaagaaaatgatgatgaattaaaaaagaggata
gatggtcttagaaaacaatctaagggtaaatataatgaagaattagaaacaaaggaaaag
ttatataaaataactcataaaaatttagaaaaatataatgaagctaaaagtcaaccatac
ttcgggagaatagattttagagaatataagcgggataatgagattttttatataggaaaa
tttggacttatggatatgacaactggtgatgaaaaggttatagattggagatcaccaata
gctgatttatattatagtggaacttatggagaagttttttatagagcacctatgggaata
atcagtggtgagttaagtcttaaaagaaagtttttgattaaagaaggtaaacttataaat
gcttttgatgagggaataaatgaaataattttaagatcagcaggtggtggagaaaatgtt
ctaatggatgaatatttaaaaattaatttagagcaaagtgtaagcaataaattaaaagat
gttgttgccaccatacaaaaggagcaaaatgatataataagagccgaaaagaatacagca
cttatagttcaaggttcagctggatcaggaaagactacagtggcacttcatagattagct
tacttaatatataaatataatggaaaacttaaaggagaagatattttagttgtagctcct
aataagttatttttagattatatatcagaagttttacctgatcttggaataaacactgtt
aaacagattacttttgaagaaatagctcttgaagtattgaaacttaaaggaaaactaatt
acaaaggataaaaagctttcagatatattagaagtgaaagatagtgagaatttaaagtat
atgactaaaagcagtagcattaaaggtactatggaatataagctgcttatggataaatat
atagagtatgtagagttaaaagatttagatatagaagatataaaggttgaaagttactta
ctttttgataaaaaagaaataaaaagattatattctaaggatatggtaaatttatcttta
aataatagaaaagatgaaataaaaagatattttacattaaaaatagatgaaaaaataaga
aatgtactggataaaatagatttttcttacgaatatatggtagcaagagtgaaaaaaact
acggaggatggtcctttaagaagaaaaagactaataggattatatgatgaaagagataat
aagaaagtgcaaataaagcaagcaagtattaaaaattttgaagattattttaataagtgg
aaaataacggatactaaaagattttattttgacttatttaataaagaagaacttttcaat
gaagttattaaggataaaatacctaaaaaacttgctttgtatatgaaaaatgaactaagt
tacaattttgaaaatgatatttttgatagtgatgatttggcagctatgatgtatttgaaa
ttcaaaatagaaggggtaccagaaaaatataaatataaacatatagttatagatgaagca
caagattatagtatgtttcaaatagctgtaataaatgaaatggtttcaaatagttctttg
acaatagtaggagatatagggcaggggatatattattataagggtatagaaagatgggaa
ggcttagtagaggaggtatttaaaaataaatctacttatgtacagctcactcaaagttat
cgttctacaatagaaataatagaatttgcaaatagaatacttaaaaaacaaagaaataaa
ttaaaacctgctatgcctgttttaagacacggtaaatctccggaaattattgagtttaat
aataatagagagtttgcagaaaaattagattctatagttgaagaagtaaaagctatggat
aaaaagagcatagcggttataggaaaaacttatgaagaatgtaaaaagataaaagagcat
ttgaaaaaatatagtaattataaatgggagcttgttaaagaaacagataaaaatttaaaa
ttggagaaaataatagtaccttcttatatgacaaaaggtttagaatttgattgtagtatt
atatataattgtaataaggataattataaggataatgaattagacaaaaaaatactatat
gtttgtcttactagagcactgcatttgcagtatgttttttataataaatctatatctaaa
cttattgaataa
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