Clostridium scatologenes: CSCA_2147
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Entry
CSCA_2147 CDS
T03803
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq03420
Nucleotide excision repair
csq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSCA_2147
03430 Mismatch repair
CSCA_2147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_2147
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSCA_2147
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSCA_2147
MMR (mismatch excision repair)
Other MMR factors
CSCA_2147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
DEAD
PhoH
Viral_helicase1
UvrD_C_2
SLFN-g3_helicase
ResIII
NACHT
AAA_30
NPHP3_N
AAA_16
DUF2852
nSTAND3
AAA_11
Cystatin
Mg_chelatase
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AKA69272
UniProt:
A0A0E3M974
LinkDB
All DBs
Position
2323922..2326156
Genome browser
AA seq
744 aa
AA seq
DB search
MNNFEWKLENEWLQEVLKEARKQFNEKHDFKEKFKKDSIETQKQLWEDVGPLSITNGLDQ
VVDFMEFITTMKIQKKRHEFVRKLEEKYKKMLLSPYFGRMDFLEKGDEKTQKCYIGSFNL
INENFDFLVYDWRAPISSMYYDYEIGKANYICPEGKIHGEITLKRQYKINNGKIEYMFDS
NLNIDDEMLQDMLSKSTDNKMKNIVTTIQREQNKVIRNEDYKNLIVQGPAGSGKTSIALH
RIAYILYKHRDKIASKNIIIFSPNEIFNEYISNVLPQLGEENMCQTTFKEYMQKILESDF
KKEDYSEMMENILATNKEPMYQKRIMSIKFKSSMQFIDILKNYIDYIEKKDRSFKDVIIK
DRVIISSKDLQELFFKDYIQLPLKRRLQKIRERILFLIDPYEKLLLEEVTNELSESASYI
NNGEVREHSTAIVKNKMKDIYSEINKMTEFNLIDIYKKLFIKLECFSTGYNTGYNKKEIN
EIKSYTLENLKAKKLNYEDQPPLLYLKGALEGIPKTSEIKYVIIDEAQDYTPLQYEIFYQ
LFNHANITILGDLNQSINPFMNVGDYSNISHIFPKNNTFIINLTKSYRSTMEITKFSRRL
LGKEITDGCVERNGAEPLLLGFSNEKAIKEKFIKDIKEYKEKGYKSIGIITRTVKEANEV
YNFLKERIYVKAILKDDDEYVSDTLVIPAYLAKGLEFDVVLIYNAGNENYCCEEERLLLY
TACTRALHVLRIYYSGRCSPLLHD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaactttgaatggaaacttgaaaatgaatggctacaagaagtactcaaagaagct
cgaaaacaatttaatgaaaaacatgattttaaggaaaaatttaaaaaggattccattgag
acacaaaaacagctttgggaagatgtaggccctttatccataactaatgggttggatcag
gttgtagactttatggaattcatcacaactatgaaaatacagaaaaaaagacatgaattt
gtgagaaaacttgaagaaaaatataaaaagatgcttttatcaccctatttcggcaggatg
gattttcttgaaaaaggtgatgagaaaactcaaaaatgttatattggaagcttcaatctt
atcaatgaaaattttgatttcctagtatatgattggagagcacctatttctagtatgtac
tatgattatgaaattggaaaagctaactatatatgtcctgaaggaaagattcatggcgaa
atcactttaaaaagacagtacaaaatcaataatggtaaaattgaatatatgtttgacagc
aatctaaatattgacgacgaaatgcttcaagatatgttgagcaaaagcactgataataaa
atgaagaatatagtgacaactattcaaagagaacaaaataaagtaattcgtaatgaagat
tataaaaatttgattgttcaaggtcctgctggaagtggtaaaacttccattgctcttcat
agaatcgcatacatcttgtataagcatagagataaaatagcatcaaaaaatataataata
ttttctccaaatgaaatttttaatgagtacatttctaatgtattacctcaacttggagaa
gagaacatgtgtcaaactacatttaaagagtatatgcaaaaaattttagaatctgacttt
aaaaaggaagattacagtgaaatgatggaaaatattcttgcaactaataaggaaccaatg
tatcaaaaaagaataatgagtataaaatttaaatcttcaatgcaatttatagatatacta
aaaaactatatagattatattgaaaaaaaagatagaagctttaaagatgtcattataaaa
gacagagtgataatctcctctaaggatttgcaggagctgttttttaaagattatatacag
cttccattaaaaagaagacttcaaaagataagagaaagaatactatttcttatagatcct
tatgaaaaacttctgcttgaagaagtaaccaatgaacttagtgaatcagcttcttatata
aataatggagaagttcgagagcacagtacagctattgtaaaaaataaaatgaaggatata
tattctgaaatcaataaaatgacagaatttaatttaatagatatttataaaaagcttttt
ataaaattggaatgtttttctacaggttacaatactggatacaataaaaaggaaattaat
gaaataaaaagctatactttggaaaacttgaaggctaaaaagcttaattatgaggaccaa
cctcctcttctatatcttaaaggagcactagaaggaattcctaaaacctcggaaatcaaa
tacgttattattgacgaagcacaagattatacaccactacagtatgaaatcttttatcaa
ctttttaatcatgctaatataaccatactgggtgaccttaatcaatccataaatcctttt
atgaatgtaggagattatagcaatatatctcacatatttcctaaaaataataccttcata
ataaatttaaccaaaagttacagatcaacaatggaaatcactaaattttcaagaaggctg
cttggcaaggagattactgatggatgtgtagaaagaaatggagctgaacctttactcctt
ggcttttcaaatgaaaaggctataaaagaaaaatttattaaagatataaaagagtataag
gagaaaggttataaatccatcggcattataacaagaactgtaaaagaagcaaatgaagta
tataattttttaaaagaaaggatttatgttaaagccatattgaaagatgatgatgaatat
gtaagtgataccttggtaatcccagcatatctcgccaaaggattagaatttgatgtagtt
cttatatataatgcaggaaatgaaaattattgttgtgaggaagaaaggcttctgctatac
actgcttgtaccagagctctccatgttttacgcatatattattcaggcagatgcagtcca
ttattgcatgattaa
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