Clostridium scatologenes: CSCA_2246
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Entry
CSCA_2246 CDS
T03803
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq03420
Nucleotide excision repair
csq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSCA_2246
03430 Mismatch repair
CSCA_2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_2246
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSCA_2246
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSCA_2246
MMR (mismatch excision repair)
Other MMR factors
CSCA_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
DEDDh_C
AAA_30
DEAD
DNApol_Exo
ResIII
AAA_11
Soc
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AKA69371
UniProt:
A0A0E3GQY3
LinkDB
All DBs
Position
complement(2437080..2439668)
Genome browser
AA seq
862 aa
AA seq
DB search
MSMNEQQEMLINELERNVILLASAGTGKTETLSKRVANIIDKGKADPSEILCITFTNKAC
KEMRERIEGIVGASAKDITVKTFHSFCFDVIKQEAKKGTDVFTDFTIFDEEDCKELIKYC
NYFDFSVSTLQKFIDTVKLTIAKNNIYSNDTVEDCSSAVRMIFKTNEDKINQICNEKGNL
NYELKEILRDKGSIFVNSYNSLLYYNHGLDFADLIIKAKELFNNTEVINSYINRYKYINI
DEVQDTSMLEYSIIEKLFKENNVLICGDKFQTIYGWRGSEPNRIFKSFKENYAPKEIIFN
TNYRATKNLTEASLKYLENAFPIDMRDTYKEGIESESKDDGDKISLKIADNLREEARFIY
DEVINLEKKNGNADNICVLTRDNRYNINLSEQLKSIMKPEAVNFEFILVDQFKFFRRQEI
KDVIAFLKLIANRYDSISLKRIVKRLPTGVGDKTFEAIESEKYKKLGISLSDFIDDNVFK
YGDKYSLLIDEFQKDNIIVFDVESTGVDVTEDEIIQIAAIKVNKNGQVTEKFERFLKNNK
SVKNSEHVHGFSDEFLKKNGEDKNTVLKEFVRFSEDSVIVGHNVQYDINILTSELQRAGL
GKPKFKAFYDTLDIYRRFHPNLRNHKLETLSNIFETENKPSHDAMDDIQATKDILVRAIK
DDIIPTSMERISYMSKHLKAFNNVASKLNNLFEEAEGSRPHDIVNKIVNGFSLKTLYTGD
EGREKIERLRDFYVLLREIDNKNKNSRDSLLDIIRITSLSNGELESLVINRTKKPRIPII
TVHQAKGLEYETVFISGAQQNTFPSYMSIKSNNLEEEKRTFYVAMTRAKKHLYITCNTDG
RYKRTTKSEFIDFIPSNYINIV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgaatgagcagcaggagatgttgataaatgagcttgaaagaaacgtcatatta
cttgcatcagcaggtactggaaaaacagagactttgtccaaaagagttgcaaatataatt
gacaagggtaaggctgatccttcagaaatattgtgtattacttttactaataaagcttgt
aaggaaatgagagaaagaatcgaaggcatagtaggcgcttcagcaaaggacattacagta
aaaacattccacagcttttgttttgatgtaattaaacaggaagctaaaaagggaacagat
gtttttactgattttacaatttttgatgaagaagattgtaaggagcttataaaatactgt
aattattttgatttttcagtttcaacattacagaagtttattgatactgtaaaattgacc
attgctaaaaataatatttatagtaatgatactgtagaagattgtagtagtgctgttaga
atgatttttaaaacaaatgaagataaaataaatcaaatatgtaatgaaaaaggtaattta
aattatgaattaaaagaaattttaagggataaaggaagtatttttgttaattcttataac
tctttactttattataatcatggtcttgattttgcagatttaataattaaggctaaggaa
ttgtttaataatacagaggtaattaattcatatataaatagatacaagtacataaatata
gatgaagtacaagatacaagtatgctggagtattccataatagaaaagttgttcaaggaa
aacaacgttctaatatgtggagataaatttcagacaatttatggttggagaggttctgag
cctaataggatatttaaaagctttaaagaaaattatgctccaaaggaaattatatttaat
actaattatagagctacaaaaaatttaacagaagcttcgttaaaatatcttgagaatgcc
tttccaatagatatgagggatacatataaagaaggtattgagagtgaatcaaaggatgat
ggagataaaatttcattaaagatagcagataatttaagagaagaggcaagatttatatat
gatgaagtaataaatttagaaaagaaaaatggaaatgcagataatatatgcgtactcaca
agagataatagatataatataaatttaagtgaacaattaaagagtattatgaaacctgaa
gctgtaaattttgaatttattttagtggatcaatttaaattttttagaagacaagaaata
aaggatgtaatagcttttttaaagctcattgcaaacagatatgattctattagtttaaag
agaatagtgaagcgactaccaacaggggtaggagataaaacctttgaagccattgaatca
gaaaaatacaaaaagttaggtatatccttatcagattttatagatgataatgtgttcaaa
tatggtgataaatattcattacttatagatgaatttcagaaggataatattatagtattt
gatgtggagagtacaggagttgatgtaactgaagatgagattattcaaattgcagctatt
aaggtaaataaaaatggacaagtaacagagaaatttgaaagatttcttaagaataataaa
tcagttaagaactcagagcatgttcatggttttagtgatgaatttttaaagaagaatgga
gaagataaaaatactgttttaaaagaatttgtaaggttctcagaggactcagtaatagtt
ggacacaatgttcaatatgatattaatatattgactagcgaacttcaaagagctggattg
ggtaagcctaaatttaaagctttttatgatacattagatatttacagaagatttcatcca
aatttacgtaatcataagcttgaaacattaagtaatatatttgaaactgaaaataaacca
agtcatgatgcaatggatgatatacaagctacaaaggatattcttgtaagagccattaag
gatgatattatacctacttcaatggagagaatatcttatatgtcaaaacatttaaaagcg
tttaacaatgtagcttctaaattaaataatctttttgaagaagcagaaggaagtagacct
catgatattgtaaataaaattgtaaacggctttagtttaaaaactttatacactggagat
gaaggtagagaaaagattgaaagacttagggatttttatgtgcttttaagagaaattgac
aataagaataaaaacagcagggattccttattagatattattagaataacttctctttca
aatggtgagttggaatcactcgttattaatagaaccaaaaagcctagaataccaataata
acagttcatcaggcaaagggattagagtatgaaactgtatttatttctggtgcacagcag
aatacatttccatcatatatgtcaataaagtcaaataatctggaagaagaaaaaagaact
ttttatgtggcaatgacaagagctaaaaaacatctttatattacctgcaacactgatgga
aggtataaaagaacaaccaaaagtgagtttatagattttataccatcaaattatataaat
atagtataa
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