Clostridium scatologenes: CSCA_2449
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Entry
CSCA_2449 CDS
T03803
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq03420
Nucleotide excision repair
csq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSCA_2449
03430 Mismatch repair
CSCA_2449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_2449
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSCA_2449
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSCA_2449
MMR (mismatch excision repair)
Other MMR factors
CSCA_2449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
Imm71
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AKA69574
UniProt:
A0A0E3JZ94
LinkDB
All DBs
Position
complement(2678175..2680385)
Genome browser
AA seq
736 aa
AA seq
DB search
MIEETLKKEFCYLRDRIIEKRYRYLDLMQREAVLSNENNYVVIACPGAGKTQVIINRIDY
LCTFGPIYKTDYIPCSLKAENLELMREYLNDYSSEKNSIIINRIIHSINDMKVNPNNMVV
ITFTKAAAVNMKKRYINMTGSKITPFFGTFHGLFYKILIRYMGRINIIDSSKTYRIINEV
LISFIDSVGDEKVKEVINNISLFKNSKQELEYFKPSIDKDIFIKCFRVYEEYKEENQLMD
FDDLQLNAQKVFLENTQLLKAYKKLFKYLLVDEFQDCDGLQIELLQMLGGNGSIFAVGDE
DQCIYGFRGSRPDCMVNFNEYFKNGKKIFLQTNYRSNENIVDISKKIILGNKNRNSKIIE
ANKKTKGIINFFNLSDEKQQALNICKIIKNMCEDNSYSLEDFAVLYRTNLENRSIVDLML
KKEIPFKILDKQYNFFEHFVCKDLIAYLKLSLDITDKESFSRVINKPFRYVSKVHIEKVK
KNIYKESCFKILTEIEDLPIFQIKNLERLENDILKLNKMSLRDALNFITKDLGYYDYIND
YSGRLKMDSMELKDVIEEFKSSASDYVGIIPFLAHIEDVEEKLKNKSKEDSGVILSTIHS
VKGMEFKNVFIINCNEGVIPHINSIPKNVEEERRLFYVGVTRAIDNLTLYSTNMFKGKSA
HMSRFIEESGIYKSIREENTEKLKSIFNMGDEITHRTFGKGKIVSYENSYVNIRFDNSIE
RKFDAYVLKNSDLLVK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagagacattaaaaaaagaattttgctatttaagggatagaattatcgaaaaa
cgttatagatatcttgacttaatgcagagagaagcagttttgagtaatgaaaataattat
gttgttattgcatgtcctggagcggggaaaactcaagttattattaataggattgattat
ttgtgtacatttggtcctatatataaaacagattatattccttgttccttgaaagcagag
aatttggaacttatgagggaatatttaaatgattatagttctgaaaaaaactcaataatt
ataaataggataatacatagtataaacgatatgaaagtcaatcctaataatatggtagtg
ataacttttactaaagcagctgctgtaaacatgaaaaaaagatatataaatatgactggc
agcaaaatcactcctttttttggaacatttcacggacttttttataaaatacttataagg
tatatgggaaggattaatataatagatagttcaaaaacttatagaataataaatgaagtt
ttgatatcctttatagattcagtaggagatgaaaaagtaaaagaagtaataaataacata
tctctttttaaaaatagcaaacaggagttggaatattttaagccaagcatagataaagat
atttttataaaatgctttagagtatatgaagaatataaagaagaaaatcaacttatggat
tttgatgaccttcaactgaatgcacaaaaagtatttttggaaaatacacagctcttaaaa
gcatacaaaaaactttttaaatacctattggtagatgaatttcaagattgtgatggtttg
caaatagaacttttgcagatgcttggaggtaatggttctatttttgcagtaggggatgaa
gatcaatgtatttatggttttagaggctcaagaccagattgtatggtgaattttaatgaa
tattttaagaatggaaaaaagatatttttacagactaattatagaagtaatgaaaatata
gtagatatttcaaagaaaataatactaggcaataaaaataggaatagtaagatcatagaa
gcaaataagaaaactaaaggtattataaatttttttaatttgagtgatgaaaaacaacaa
gcattaaatatatgtaagataataaaaaatatgtgtgaggataactcatatagtttagaa
gattttgcagtattgtatagaactaatttagaaaatagaagtattgtagatcttatgcta
aaaaaagaaataccctttaaaatacttgataagcagtataatttttttgagcattttgta
tgtaaagatttgatagcttatttaaagttatccttagatattacagataaagaaagtttc
agtagagtaattaataaaccttttaggtatgtaagtaaagttcatattgaaaaagtgaaa
aagaatatatataaagaaagttgttttaagattttaacggaaatagaggatctacctatt
tttcaaattaagaatttagaaagattggaaaatgacatattgaagctaaacaaaatgagc
ttaagagatgctttgaattttataacaaaggatttaggttattatgattatattaatgac
tacagtggacgattaaaaatggacagcatggaactaaaggatgtaatagaagaatttaaa
tcttcagcatctgattatgtcggtataatcccatttttagctcacatagaagatgtggaa
gaaaagttgaaaaacaagtcaaaggaagatagtggagttatattaagtaccatacatagt
gtaaaaggaatggagtttaaaaatgtatttattataaattgcaatgaaggggtaataccg
catataaatagcattcctaaaaatgttgaagaggaaagaaggttgttttatgtaggtgtt
acaagagctatagataatttaactttatacagtactaatatgtttaaaggaaaatcagca
catatgtctagatttattgaagaatcagggatttacaagagcattagagaagagaataca
gaaaagttaaagagtatatttaatatgggagatgaaattacacatagaacctttggtaaa
ggaaagatagtatcttatgaaaatagttatgtaaatattaggtttgataattctatagaa
agaaaattcgatgcttatgtgttaaaaaatagtgatttgcttgtgaagtaa
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