Clostridium scatologenes: CSCA_2557
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Entry
CSCA_2557 CDS
T03803
Name
(GenBank) Microtubule-severing ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csq
Clostridium scatologenes
Pathway
csq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CSCA_2557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csq03019
]
CSCA_2557
03009 Ribosome biogenesis [BR:
csq03009
]
CSCA_2557
04131 Membrane trafficking [BR:
csq04131
]
CSCA_2557
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csq04147
]
CSCA_2557
Messenger RNA biogenesis [BR:
csq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CSCA_2557
Ribosome biogenesis [BR:
csq03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CSCA_2557
Membrane trafficking [BR:
csq04131
]
SNARE
SNARE associated proteins
Others
CSCA_2557
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CSCA_2557
Exosome [BR:
csq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CSCA_2557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
AAA_14
RuvB_N
AAA_2
AAA_5
AAA_22
TIP49
Sigma54_activat
AAA_7
IstB_IS21
AAA_18
RNA_helicase
AAA_33
nSTAND3
Mg_chelatase
Zeta_toxin
AAA_24
TsaE
AAA_28
ABC_tran
SLFN-g3_helicase
AAA_lid_PRS2_C
ATPase
NB-ARC
DUF815
Parvo_NS1
AAA_17
NTPase_1
NPHP3_N
AAA_19
CDC48_2
AAA_29
AAA_3
ATPase_2
bpMoxR
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
AKA69682
UniProt:
A0A0E3M6W3
LinkDB
All DBs
Position
complement(2809585..2811699)
Genome browser
AA seq
704 aa
AA seq
DB search
MVGINTIKLKVKEGLVEDSRKGIVRINREDMEKINIDTGDVISVKGKKDTVAKVYPSFND
IYGVPLIQMDGIIRRNAGAGLNEAVTVSKIEVKTAREVVLSPIDMFFKCKKDDVVEIKNL
IKGIPILIDDEVSLMVYGHNEIGFHIAGTAPSGPVQVTEKTELVFVECELGGSKTRVTYE
DIGGLNAQVKKIREIVELPLKYPEIFRRLGFEAPKGILLYGPPGTGKTLIAKAIASETEA
HFIHVNGPEIMNKYYGESEAKIRQIFKEARNKSPSIIFLDELDSIAPRRENVHGDVEKRV
VAQLLALMDGLESRGQVVVIGATNIPDSLDTALRRAGRFDKEIAIMPPDKDGRFNILQIH
TKGMPLDDDVELEELAKITHGFVGSDISALCKEAGMVALRSSMDKIGLDGKIPLFKISMD
DFMKALMEIQPSATREYATEIPDVRWEDIGGLNEIKKTLKTLLEIPFIDSKLCKEYNFTS
PKGILLTGPSGTGKTLIAKAAGNSTKSNFITISGLTLASNWKGQSEKILHDIFIKAKQSA
PCILFFDEIDAIIRSRSEVSNSLTERLISQLILEFDDLENSNKVTVLAATNRMDLIDSVL
IREGRFEYILEFNLPDVHERECILKIHSERLPTLKNVDFRRLAEATEGMTGAELANLCHK
SSFIALTEAMKTGSKVKIDENIFERAIKNVNAEKQLKEVVARNS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggttggaatcaatactattaaattgaaagttaaagaaggattagtagaagattcccgt
aaaggcatagttagaataaatagagaagatatggagaagatcaatatagatacaggagat
gtcattagtgttaaaggtaaaaaagatactgtagctaaggtttatccatcatttaatgat
atttatggagtaccacttatacagatggatgggattattagaaggaatgctggtgcaggg
ttaaacgaggcagtaacagttagtaaaattgaagtaaaaacagcaagggaagttgtgctt
tctccgatagatatgttctttaagtgtaaaaaagatgatgtagtggagataaaaaattta
ataaaaggtattccaatattaattgatgatgaagtatctttaatggtttatggacataat
gaaattgggtttcatatagcaggaacagcaccatcaggtccggttcaagtaactgaaaaa
actgaacttgtttttgtagaatgtgaacttggaggttcaaaaactagggttacttatgaa
gatataggaggtttaaatgctcaagtcaaaaaaataagggaaattgtcgaattacccttg
aaatatccagaaatatttagaagattaggttttgaagcaccaaaaggtattctactatat
ggacctccaggtacaggaaaaactttaattgctaaggcaatagcatctgaaacagaagct
cactttatccatgtcaatggtccagaaataatgaataaatattatggcgaaagcgaagct
aaaattcgacaaatttttaaagaagctagaaataaatctccaagtataatttttcttgat
gagcttgattctattgcaccaagacgagaaaatgttcatggtgatgtggaaaaaagagta
gtcgcacaactgcttgctcttatggatggtctggaaagcagaggacaagttgttgtaata
ggtgctactaacataccagattcattagatactgcattaagacgtgctggtagatttgat
aaagaaattgctataatgcctcctgataaagatggaaggtttaatatattgcaaatccat
acaaaaggtatgcctcttgatgatgatgtagaattagaagaattagctaagataactcat
ggttttgttggatcagatatttctgctttatgtaaagaagctggtatggtagctttgcgg
agctctatggataaaattggactagatgggaaaattccgctattcaaaatttctatggat
gattttatgaaagctttaatggaaatccaaccatcagctacacgtgagtatgctacagaa
attcctgatgtaagatgggaagatattggagggttaaatgaaattaagaaaactttaaag
actttattggagattccattcatagattccaagttatgcaaagaatataattttacttct
ccaaaaggcattttacttactggaccatcaggtacaggtaaaactttaattgcaaaagct
gctggaaattctacaaaatcaaattttataactataagtggtcttacattggcctctaat
tggaagggacaatcagaaaagattttacatgatatatttattaaagcaaaacaaagtgct
ccatgtattttattctttgatgaaatcgatgccattattcgttctagatcagaagtgtca
aatagtttgacagaaagacttataagccaacttatattagaatttgatgatttggaaaat
tctaataaagttactgtgcttgctgctactaacagaatggatttaattgattcagttttg
ataagagaagggcgttttgaatatatactagagtttaatttgccagatgttcatgaaaga
gaatgtattttaaaaattcattctgaaagattacctacattaaagaatgtagacttcaga
agattagctgaagctacagaaggaatgacaggagcggaattagctaatctatgtcataaa
tcttcatttatagcacttacagaggcaatgaaaacaggttcaaaggtgaaaattgatgaa
aatatttttgaacgtgccattaaaaatgtgaatgccgaaaaacaacttaaggaggtggtt
gcccgcaattcttaa
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