Clostridium scatologenes: CSCA_2794
Help
Entry
CSCA_2794 CDS
T03803
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csq03032
]
CSCA_2794
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_2794
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CSCA_2794
DNA replication proteins [BR:
csq03032
]
Prokaryotic type
DNA Topoisomerases
CSCA_2794
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CSCA_2794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
Hox9_act
Toprim_4
HVO_2753_ZBP
Zn_ribbon_3
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AKA69919
UniProt:
A0A0E3M9V4
LinkDB
All DBs
Position
complement(3070074..3072179)
Genome browser
AA seq
701 aa
AA seq
DB search
MGQKLVIVESPAKAKTIGKYLGKNYIVEASMGHVRDLPKSQLGVDIDNNYNPKYITIRGK
GELLDKLKKEAKKSDKIYLATDPDREGEAISWHLSHVLKLDEDDKCRIEFHEITKNAIKS
AIKEPRKINVDLVNAQQARRVLDRLVGYKISPILWRKVKWGLSAGRVQSVTLKMVCDREK
EIENFVAKEYWTVECELAKNKTKKSFKVKLNTFNKKKIEIGTKEEVDKVIKELNDGEFIV
KGIKKTSKNKNPLAPFTTSTLQQDAYKKLNFATKRTMSIAQQLYEGIDIKGYGTVGLITY
MRTDSVRIADEAQEACKNFVSKSFGEDYVPKQYRTFKGKKNAQDAHEAIRPTNVEITPQI
AKESLKDEQYKLYTLIWNRFVASQMSSCIMDVTSVSIENGGYLLKASGSLVKFDGFMKVY
EYATEEEKEDINLPLLEEGELLQKKNIEGKQHFTQPPARYSEATVVKTLEEKGIGRPSTY
APIISTLLDRKYVEREKKTLKPTELGYIVNNIVSEYFKQIVDEEFTAEMEEKLDCVEEGK
QNWNTVVNEFFTPLKDAIDIAEKEVAKVTIEDKVTDIKCEKCGRFMVIKHGRFGDFLACP
GYPECKNTKAIVEELDVKCPKCGGNILIKRSKKGRKFYGCSNYPDCDFVSWLEPVSQKCS
VCGSYMVKKHSKSKGDYLQCSNNECKNIEDIAENQSISENK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaaattagttatagtagaatcaccagcaaaagctaagactataggaaaatat
ttaggtaaaaactatatagtagaagcatctatgggacatgtaagagatcttcccaagagt
caattgggagttgatatagataataattataatcctaaatatataactataagaggtaaa
ggggagttattagataaattaaaaaaggaagccaaaaaaagtgataaaatataccttgca
accgaccctgatagagaaggagaggctatttcatggcatttatcacatgtacttaaatta
gatgaagatgacaaatgtagaatagaatttcatgaaataacaaaaaatgctataaaaagt
gctataaaggaaccaagaaaaataaatgtggatttagttaatgcacaacaagcaagaaga
gttttagacagattagttggatataagataagcccaattttatggagaaaagtaaaatgg
ggattaagtgcaggaagagttcaatctgttactttaaaaatggtatgtgatagagaaaag
gaaatagaaaactttgtagcaaaagaatactggactgtggaatgtgaattagctaaaaat
aaaactaaaaaatcttttaaagttaagttaaatacttttaataagaaaaaaatagaaata
ggaacaaaagaagaagtagataaagtaataaaagaacttaatgatggagaatttatagta
aagggtattaagaaaacatcaaaaaataagaatccattagcgccatttacaactagtact
ttgcagcaggatgcttataaaaagttgaattttgcaactaaaagaactatgtcaatagca
caacaattgtatgaaggtattgacataaagggttatggtacagttggtcttataacatat
atgagaacggattcagttagaatagctgatgaagcacaggaagcttgtaaaaattttgtt
agtaaaagttttggtgaagattatgtaccaaaacaatacagaacgtttaagggaaagaaa
aatgctcaagatgcacatgaagcaataagaccaaccaatgtagagataactccacaaatt
gctaaagaaagcctaaaagatgagcaatataaattgtatacattaatatggaatagattt
gtggcaagtcaaatgtcatcttgtataatggatgttacatctgtaagcatagaaaatggt
ggatatttacttaaggcaagtggttctttagttaaattcgatggatttatgaaagtatat
gaatatgcaacagaagaagaaaaagaagatataaatttacctctattagaagagggtgaa
ttgcttcaaaaaaagaatatagaaggtaaacaacacttcacccagccaccggctaggtat
tcagaagctaccgttgtaaaaactttagaagaaaaaggtataggaaggcctagtacttat
gctccaattatatctacattactggatagaaagtatgtagaacgtgaaaaaaagacttta
aaaccaacagaacttggctatatagtaaacaatatagttagtgagtattttaaacagata
gtagatgaagaatttacagcagagatggaagaaaagttagattgtgttgaagaaggaaaa
caaaattggaatacagtagtaaatgagttttttactccactaaaggatgctatagacata
gctgaaaaagaagtagctaaagttactatagaagataaagttacagatataaaatgtgaa
aagtgtggaagattcatggttataaaacatggtagatttggagattttcttgcatgccct
ggttatcctgagtgtaaaaacactaaagcaatagtggaggaattagatgtaaagtgtcct
aaatgtggtggaaatattttaattaagagaagtaaaaaaggaagaaaattctatggatgc
agtaattatccagactgtgactttgtaagttggcttgaacctgtttctcaaaaatgctct
gtttgtggaagttatatggtaaaaaaacatagtaagagtaaaggtgattatttgcagtgt
tccaacaatgaatgcaagaatatagaagatatagcagagaatcaaagcattagtgaaaat
aaataa
DBGET
integrated database retrieval system
