KEGG   Clostridium scatologenes: CSCA_2842
Entry
CSCA_2842         CDS       T03803                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
csq  Clostridium scatologenes
Pathway
csq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CSCA_2842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csq03400]
    CSCA_2842
Enzymes [BR:csq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CSCA_2842
DNA repair and recombination proteins [BR:csq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CSCA_2842
SSDB
Motif
Pfam: PriA_C DEAD PriA_3primeBD ResIII Zn_ribbon_PriA Helicase_C AAA_30 AAA_19 AAA_11 T2SSE SLFN-g3_helicase Zn_ribbon_6 TrwB_AAD_bind nSTAND3 PhoH PIF1 MRP-L20 zf-CHY UvrD-helicase AAA_7 DUF1258 NPHP3_N SRP54 Viral_helicase1 DUF6980 Trm112p Zn_ribbon_PF0610
Other DBs
NCBI-ProteinID: AKA69967
UniProt: A0A0E3JP30
LinkDB
Position
complement(3115436..3117640)
AA seq 734 aa
MYSYAGIVVSNSSLQVDRIFTYKIPETLVNKIDIGIRVKVPFGMGNKKIDGFVVELYDEY
TGNTRIKEISGICDKFTLFTKDDVILIKEMKSKYLSTYLECIKVFIPTGISNGMKNKTEI
QVYTGEVDLSEKFKKEPYLSIYSIVKKNPGIYNKNALAKKFSVSLSSINTMIKHGFLDQK
ENVVNRYNVRQYEKYSEKILNVEQQSAVDAILNSSKSVFMIHGVTGSGKTEIYMHLVSNM
MEKNKESIILVPEIALTPQMVERFKGRFGKDISVFHSKLSPGERYDEWLRVKEGKVKVAI
GARSAIFLPFSNLGMIVIDEEHEGSYKSDSNPKYNAREIGEMKCRISNCKLILGSATPAV
ETYYRCKNKDIELITIKNRADNAIMPKIEIVDMRQELLNNNKSMFSKKLYESIEERLNKK
EQIILFLNRRGFSTFVSCRKCGYVFKCDNCDISLTYHRDEGKLVCHYCGSSRKSPSICPE
CGSKYVKYFGVGTEKIEQEIKKYFPDARTLRMDFDTTRGKNSYETIYNTFKKEKADILIG
TQMVAKGLDFKNVTLVGIIAADLSLNLPDFRSNERTFQLITQVSGRAGRGEKRGEVIVQT
YSPESYSIICAANNNYKSFYEEEIKVRNIMEYPPFVDLFLINMSSKNENILIKSIQNVGI
FLKNVLEKNDTIKILGPCPCEISKIKEFYRWQIILKGDMKKEIKEKIRKLVYDLLKNVYN
DIRVSIDVNPNSLL
NT seq 2205 nt   +upstreamnt  +downstreamnt
gtgtacagttatgcaggtattgtagttagtaatagttccttacaagtagatagaattttt
acatataaaataccagaaacattagtaaataaaatagatattggcattagggtaaaagtc
ccttttggtatgggaaataaaaaaatagatggatttgtagtagaactttatgatgaatat
acaggtaatacaagaattaaagaaatatcaggaatatgcgataagtttaccttgtttacc
aaagatgatgtaattcttattaaagagatgaaaagtaaatatttatcaacttatttagaa
tgcataaaagtctttattccaacaggtatttctaatggaatgaaaaataaaacagaaata
caagtgtatacaggagaagtggatttaagtgaaaaatttaagaaagaaccatatttaagt
atatactccatagtaaaaaaaaatccaggtatttataataagaatgctttagcaaaaaaa
tttagtgtatcattatcttccataaatacaatgataaaacatggttttctcgatcaaaag
gagaatgtggtaaatagatataatgtaagacagtatgaaaaatactctgaaaagatttta
aatgtggaacagcaaagtgctgtagatgctatattaaattcgtccaaaagtgtgtttatg
atacatggagttacaggtagtggaaaaaccgaaatatacatgcatttggtaagtaatatg
atggaaaaaaacaaagaatctataatactggtacctgaaattgcacttacacctcaaatg
gtggaaaggtttaaaggaaggtttggaaaagatataagtgtttttcacagtaagttatca
ccaggggaaagatacgatgaatggctaagagtaaaggaaggaaaagttaaagtagcaata
ggagctagatctgcaatatttcttccatttagcaatttaggaatgatagtaatagatgaa
gaacatgaaggaagttataaatctgatagtaatcctaaatataatgcaagagaaattgga
gaaatgaaatgtagaataagtaattgcaagttaattttgggatcagcgacgccagctgta
gaaacctactatagatgtaaaaataaagatatagaacttataactataaagaatagggct
gataatgctattatgcctaaaattgaaattgttgatatgagacaagaattgctaaacaat
aataaatctatgttcagtaaaaaactttatgaatctatagaagaaagattaaataaaaaa
gagcaaataatacttttcttaaatagaagaggtttttctacatttgtttcatgtagaaag
tgtggttatgtattcaagtgtgataactgtgatatatctctaacttatcatagggatgaa
ggaaaattagtttgccattattgtggcagcagcagaaaatcacctagcatttgtcctgaa
tgtggaagtaagtatgttaagtattttggtgttggtactgaaaagatagagcaggaaata
aaaaagtattttcctgatgctagaactttaagaatggattttgatactactagaggtaaa
aattcttatgaaacgatatacaacacttttaaaaaagaaaaggcagacatacttatagga
actcaaatggtagcaaaaggattagactttaaaaatgttacgttagtaggtataattgca
gcagatttatctttaaatttgccagacttcagatctaacgaaaggacatttcagcttatt
acacaggtttcaggtagagctggtagaggggaaaaaagaggagaagttattgttcaaacc
tatagtccagaaagctatagtataatatgtgcagctaacaataattataaaagtttctat
gaagaagagataaaagtgaggaacattatggaatatccaccttttgttgatctatttctt
attaatatgagtagtaagaatgaaaatatattaataaaaagtatacaaaatgttggtata
tttttaaaaaatgtattagaaaaaaatgatacaattaaaatattagggccttgtccttgt
gaaatttctaaaattaaagaattttatagatggcaaataatattaaagggcgatatgaag
aaggaaattaaggaaaaaataagaaaactagtttatgatttattaaaaaatgtttataat
gatataagggtaagtattgatgtaaaccctaatagtttattatag

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