Clostridium scatologenes: CSCA_3070
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Entry
CSCA_3070 CDS
T03803
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
csq
Clostridium scatologenes
Pathway
csq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CSCA_3070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_3070
Enzymes [BR:
csq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CSCA_3070
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CSCA_3070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
SSB
ACD
Motif
Other DBs
NCBI-ProteinID:
AKA70195
UniProt:
A0A0E3K1Q8
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All DBs
Position
complement(3331578..3332777)
Genome browser
AA seq
399 aa
AA seq
DB search
MYIKTLTVSELNGYIKKLVDNDFILGNSNVKGEISNFKLHSSGHIYFSIKDEYSKINCVM
FRSSAKNLKFMPENGMKVVVKGRVSVYEKDGAYQVYCNDIEPDGVGELYMAFEKLKSKLQ
NQGLFEVTHKKKIPSYARKIGVITSPTGAAVRDIINVAKRRNSTTELLIYPVLVQGMNAS
ESIIKAIEYLNKVNDIDIIILARGGGSIEELWCFNDEKLAYSIYNSKKVIITGVGHETDY
TIADFVSDRRAPTPSAAAELAVFNLEDLQSKVISYKNNLNNLIDFILKEKRNSLELLKRS
LDVNSPYSYIVNEYNNIDRLKELMNIKIRTRLEKEKEKLIKANSLLTAHNPMNILNKGYA
IIENEKIGVVNTIQNLRKLDKVKITLKDGSEEFYLNIKN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaaaactttaactgtatctgagttaaatggttacataaaaaaattagtggac
aatgattttatattaggaaactccaatgtaaaaggagaaatatctaattttaaacttcat
agtagtggacatatatatttttctataaaggatgaatacagcaaaataaattgtgttatg
tttagaagttcggcaaaaaatttgaagtttatgcctgaaaatggaatgaaagttgtagtt
aaaggaagagtttctgtttatgagaaggatggagcatatcaagtatactgtaacgatata
gagccagatggtgttggagagctttatatggcttttgagaagctgaagagtaaacttcaa
aatcaaggattatttgaagtaacacataagaagaaaataccttcttatgctagaaaaatt
ggagtaataacttcgcctactggtgcggctgtaagagatataattaatgtggcaaaaaga
agaaatagtactacagaacttttaatatatcctgttctagttcaaggaatgaatgctagt
gaaagtataataaaggctatagagtacttaaacaaagttaatgatatagatattattata
ttagcaagaggtggaggttccatagaagaactatggtgctttaatgatgaaaaactagca
tattcaatatataattcaaaaaaagttataataacaggagtaggacatgaaactgattat
actatagcagattttgttagtgatagaagagcaccaacaccttcagctgcggctgaatta
gcagtatttaacttggaggatttgcaaagtaaagttatttcttataaaaacaatttaaac
aatttaatagattttatattaaaggaaaaaaggaattctttagaattgcttaaaagaagt
ttagatgttaatagtccttattcatatatagtaaatgaatataataacattgatagatta
aaggaattaatgaatataaagataagaacaaggttagaaaaggaaaaagaaaaacttatt
aaggctaattctttacttacagcacataatccaatgaatatactaaataaagggtatgct
attattgaaaatgagaaaataggtgttgtaaataccatacaaaatttaagaaaattagat
aaggttaaaattactttaaaagatggaagtgaagagttttacttaaatattaaaaattaa
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