Clostridium scatologenes: CSCA_3101
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Entry
CSCA_3101 CDS
T03803
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csq03009
]
CSCA_3101
Enzymes [BR:
csq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CSCA_3101
Ribosome biogenesis [BR:
csq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CSCA_3101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ta1207
Motif
Other DBs
NCBI-ProteinID:
AKA70226
UniProt:
A0A0E3GRF4
LinkDB
All DBs
Position
complement(3356601..3357518)
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AA seq
305 aa
AA seq
DB search
METREFIIDENSVNARLDLFLSERMEDKSRSYIQGLIEKSQVKVNGILKKSNYKLKIKDK
VLLTIPDPVGLDIEPEDIPLDIVYEDSDVIVVNKPQGMVVHPASGIYTGTLVNALLNHCS
DLSGINGITRPGIVHRIDKDTSGILVVAKNDKSHNKLAEQLKDHSMTRAYTALVEGILKE
DDGIIDKPLGRHPVERIKISVIKDGKKAVTHYKVLERFKNNTLVECVLETGRTHQIRVHM
AYIGHPLVGDPVYGYKKQRFNLNGQMLHAKKLGFIHPSTNEYIEFMSDLPDYFKKVLNVL
RNELK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaaactagagaatttattatagatgaaaattcagtgaatgctaggttggatttattc
ttatcagaaagaatggaggataaatctagatcttatatacaaggacttatagaaaagtca
caggtaaaagtaaatggaattttaaaaaagagtaattacaagttgaagataaaagacaaa
gtgcttcttactatacctgatcctgttggattggatatagaacctgaagatataccatta
gatatagtttatgaagatagtgatgttattgtagtgaataaaccacagggtatggtggtt
catccagcttcaggaatttatactggtacattagttaatgctcttttaaatcattgcagt
gatctatctggaataaatgggataacaagacctgggattgtgcatagaatagataaggat
acctcaggtatattagtagttgctaaaaatgataaatctcataataagttagcagagcaa
cttaaggatcattctatgactagagcctatacagcattagttgaaggtattttaaaagaa
gatgatgggatcatagataaaccattaggaaggcatcctgtagaaagaataaaaatatct
gtgattaaggatggtaaaaaagcagtaactcactataaggtattggaaagatttaaaaat
aatactcttgtagaatgtgtattggaaactggaagaacacatcagataagagtgcacatg
gcttatataggacaccccttagttggagatcctgtttatggctataaaaaacaaagattt
aacttgaatggacaaatgcttcatgctaaaaagttaggttttatacatcctagtactaat
gaatatattgaatttatgtctgatctgccagattacttcaaaaaagtgttaaatgtttta
agaaatgaattgaaataa
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