Clostridium scatologenes: CSCA_3117
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Entry
CSCA_3117 CDS
T03803
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
csq
Clostridium scatologenes
Pathway
csq00300
Lysine biosynthesis
csq00550
Peptidoglycan biosynthesis
csq01100
Metabolic pathways
csq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CSCA_3117
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CSCA_3117
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CSCA_3117
Enzymes [BR:
csq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
CSCA_3117
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Chalcone_3
APOBEC2
Motif
Other DBs
NCBI-ProteinID:
AKA70242
UniProt:
A0A0E3JPG8
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Position
complement(3368577..3369965)
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AA seq
462 aa
AA seq
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MEHMTFDEIVDAVQGKIVLQGNYEKFNQISTDTRKIDKDDVFIALKGENFNGNEYIKVAS
DKGAAICIVDEIKYREDEIKKKTTIIRVEDTKKALLDLAGAYRNKLNLKVIGITGSNGKT
STKDLLAAALSSKFKVFKTQGNFNNEIGLPSMIFKLDNSYDIAVLEMGMNNLNEIHRMAE
AAKPDIALITNVGVSHIGNLGSRENILKAKLEITDFFHKNNILILNGDDDFLSEVKSNKF
SIYTTGMENENNLNACDIELKENFVEFSVKENEKKSKEIFHVEIPGKHTISNSLLAIACG
RILGMEYKDIKEGLKNLQTTAMRMDLIKGKKFNILNDCYNANPDSMKAAVDVLKNVESNR
RIAVFGTMGELGEQSYKSHKEIGEYSAKNGINLLLAFGEYNKAFEEGFKSSTKAEYKTFE
DYNEGIKYLVNEYLKEGDTVLVKASRSMKFEKIVEELKKNNL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttggaacatatgacctttgatgaaatagttgatgcagtgcaagggaaaattgtattgcaa
ggaaactatgaaaagtttaatcaaataagtacagatactagaaaaatagataaagatgat
gtattcatagccttaaaaggagaaaattttaatggaaatgaatatataaaagttgctagt
gataaaggagcagctatatgcattgtagatgaaattaagtatagagaagatgaaataaaa
aagaaaactaccataataagggttgaagatacgaaaaaagcactacttgatttagctgga
gcctatagaaataaattgaatttaaaggtaataggtataactgggtctaatggaaaaact
tctactaaggatttgttggccgcagcattgagttctaagttcaaagtttttaaaacacaa
ggaaactttaataatgagatagggcttccttcaatgatatttaaacttgataatagttat
gatatagcagtactagaaatgggaatgaataatttaaatgaaattcatagaatggcagaa
gctgctaaacctgatatcgctttaattactaatgtgggtgtaagtcatataggtaatctt
ggatcaagagagaacatattaaaggcaaaactggagattacggatttttttcataagaat
aatattttaattctaaatggagacgatgactttctttctgaagtaaagagtaataaattc
tctatatatactactgggatggaaaatgaaaacaatcttaatgcttgtgatatagaactt
aaagaaaactttgtagagtttagtgtaaaggaaaatgaaaaaaaatctaaagaaatattt
catgtagaaataccaggaaagcatacaatatctaattcactactagctatagcttgtgga
agaatattaggtatggaatataaagatataaaagaaggattaaaaaatcttcaaactact
gctatgagaatggaccttattaagggcaagaagtttaatatactaaacgattgttataat
gctaatcctgattccatgaaagcagctgtagatgttttaaaaaatgtagagtctaataga
aggatagctgtatttggaactatgggggaattgggagaacaatcttacaaatcccataaa
gaaattggtgaatattcagcaaaaaatggaataaatttacttttggcatttggagaatat
aataaagcttttgaagaaggctttaaatccagtactaaggctgagtataaaacttttgaa
gattacaatgaaggcataaaatatttagtgaatgaatatttaaaagaaggagatacagtt
ttagttaaagcttctagatccatgaaatttgaaaaaatagtagaagaacttaagaagaat
aatttatag
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