Clostridium scatologenes: CSCA_3407
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Entry
CSCA_3407 CDS
T03803
Name
(GenBank) transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csq03000
]
CSCA_3407
03036 Chromosome and associated proteins [BR:
csq03036
]
CSCA_3407
Transcription factors [BR:
csq03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CSCA_3407
Chromosome and associated proteins [BR:
csq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CSCA_3407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
HTH_Crp_2
HTH_11
MarR
MarR_2
TFIIE_alpha
PCI
Fe_dep_repress
DUF7343
HTH_CodY
HTH_60
DUF501
TrmB
Rrf2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AKA70532
UniProt:
A0A0E3M918
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All DBs
Position
3645792..3646241
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AA seq
149 aa
AA seq
DB search
MDNIDKSIINTLENNGRISHEDISKLIHISRPAIHQRVSKLESDGIIKGYRTIIDWEKLG
EPIKTLLYVKISCENFKEIVNQILSLEIPNIFIEECHRLAGEWCLLLKMRASTPTDISNF
IDTLWKIQGIKETSTTLVLSTILENGMRK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggataacatagataaaagcattataaacacattagaaaataacggaagaatatctcat
gaggatataagtaaattaattcatatttcaagacctgcaattcatcaaagggtaagcaaa
ttagaatcagatggtattataaaaggttacagaactataattgattgggaaaaacttggc
gagccaattaaaactctcctatatgtcaaaatcagttgtgaaaatttcaaggaaattgta
aaccaaattttatctcttgaaattcctaatatattcatagaagagtgtcatagattagct
ggagaatggtgtctattactaaaaatgagagcgagtacgccaacagatatttcaaacttt
attgatactctatggaaaatacaaggtatcaaagaaacgtctactactcttgttttatcc
actatattagaaaatggaatgcgcaaatag
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