Entry |
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Name |
(GenBank) DNA polymerase III, delta subunit
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KO |
|
Organism |
csq Clostridium scatologenes
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:csq00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSCA_3548
03430 Mismatch repair
CSCA_3548
03440 Homologous recombination
CSCA_3548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:csq03032]
CSCA_3548
03400 DNA repair and recombination proteins [BR:csq03400]
CSCA_3548
Enzymes [BR:csq01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSCA_3548
DNA replication proteins [BR:csq03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSCA_3548
DNA repair and recombination proteins [BR:csq03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSCA_3548
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(3782220..3783242)
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AA seq |
340 aa
MIDVFTFNENIKKGILNNCYLFCGIDEQLMKDGINSIVNKVLDKNLMDLNYIKFDGSTLE
SFESVINACETLPFMSDKKVVLVYRASFFQEDKNDSIFNRIYEYISNLPGYCILIFYDVF
KSKRDKPGKKIYKLDKRACVVKADKIKGQQLEGKIKSFFEARGKQIGRIELKVFSSLMDE
NNLNIIENEVEKLCCYTYEKSITKEDIKELFLKSNDDDIFDLVNPISQKKVKEAIEVLNE
LIYRGEKIPYILNMIERQFNRLFRVKMLLENKKSKQDVMKELNIRSDYACDIIIGQSKKF
TLKQLEHALQLCLDCEQKIKSSTVNGKTEIELLVINTITG |
NT seq |
1023 nt +upstreamnt +downstreamnt
ttgattgatgtatttacctttaatgagaatattaaaaagggtattttaaataattgttat
ttattttgtggaatagatgaacagcttatgaaagatggaataaattctatagtaaataaa
gttttagataaaaatcttatggatttaaattatattaaatttgatggcagcacattagaa
agttttgaatctgttatcaatgcttgtgaaacactacctttcatgagtgataaaaaagtt
gtattagtatatagagcctctttttttcaagaagataaaaatgatagtatttttaatagg
atttatgaatatatatctaatttacctggttattgtatacttatattttatgatgttttc
aaaagtaaaagagataagccagggaaaaaaatatataaattagataagagagcgtgtgtg
gtaaaggctgacaaaattaaaggtcagcagcttgaaggaaaaataaaaagtttttttgaa
gcaagaggcaaacaaattggaagaattgaacttaaagttttttctagtcttatggatgaa
aacaatttaaatattattgagaatgaagttgaaaaattatgttgttatacctatgaaaag
tctataacaaaagaagatataaaagagttgtttttaaagagtaatgatgatgatattttt
gatttagtaaaccctatatcccaaaaaaaagtaaaagaagctatagaagtgttaaatgag
cttatatataggggagaaaagataccatatatattgaacatgatagaaagacaatttaat
cgtttatttagggtaaagatgttactagaaaataaaaaaagtaaacaggatgttatgaaa
gaacttaatataaggtctgattatgcatgcgatataattataggacaaagtaaaaaattc
accttaaaacaattagaacatgcactacaactatgtttagactgtgagcagaaaataaaa
agttcaactgtaaatggaaaaacggaaatagaactgttagtaattaatactattacagga
taa |