Clostridium scatologenes: CSCA_3557
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Entry
CSCA_3557 CDS
T03803
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_3557
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSCA_3557
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CSCA_3557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
AAA_30
CA109-like
Motif
Other DBs
NCBI-ProteinID:
AKA70682
UniProt:
A0A0E3M7S0
LinkDB
All DBs
Position
complement(3795440..3799171)
Genome browser
AA seq
1243 aa
AA seq
DB search
MDTKWTQEQREAIFTKNCNLLVAAGAGAGKTAVLVERIIQKITDDEDDVDIDKLLVVTFT
NAAASEMRERIGDAISKKLEVAPESKNLQKQLMLLNKANIMTIHSFCLQVIKNNFHVIDL
DPNFRVCDETESILLKQETIDEIFDDKYEQSDEGFMQLVKCYGGKNDFKVENMILDLYEF
AKSNPWPEKWISTMVEQFNVEESFNFEKSSWFPVILDYMIVELQGCKSKIEKAIEIVENA
QGIDYYLEPMKKDLENINNIVQCRNLEELKYQFDNLQFEKLPVKRNKDADKEAKEKSKKI
RDEVKKKITEISEDIFLKMSSMSKDLKEMYPKMKSLGKIVMEFNEIYGAKKRERGLVDFN
DIEHFCLNILIDTEDNVDITPSKIALEYKQKFDEILIDEYQDSNEVQEVIMNAISRKNEI
PNIFMVGDVKQSIYRFRQAKPELFLDKYNRYSDNREGNERKIKLFKNFRSRPEIIFAVNY
VFNQIMSVNIGELEYDEGEMLKSGADFPELEGNVVDTESKIELHLLDKKDNDVYEENSQN
PEGTAVENINEETPDNIQIEARLVGKRIIDLINNEKFKVYDKDEKKYRNVTYKDIVILLR
TTSNWAPTFVEELKNFAIPVFADTNTGYFDNIEIRTMISLFQIIDNPIQDIPLLSILRSP
IEGFSSEEIIDIRMVDRNINFFSILKIIVENDDTDERTRHISKELRDKVSNFLNKLRKWR
KKSLYMPIDEFIWYIYTDTGYYGFVGAMSGGKQRQANLRILFQRAKQYESTSYKGLFNFI
NFINKLRNSSGDMGSAKIIGENEDVVRIMSVHKSKGLEFPVVILSGTGKNFNLMDMNRSV
LFHSELGLGPEYVNIDRRISYPTIAKQVLKKKIKVETLSEEMRILYVALTRAKEKLIITG
TAKDLEKTSEKWCEAIRYEEGKIPEYVVINAKNYLDWIVPAVAKHPSGKVIRDIGGVHDF
KTSIDDKHKWHIEFWKKEDLKSDLCDEDEKENIIKIVKNEALNDKNSVYYDEVNRRLNWE
YKYKESCNIPSKFSVSEIKRRFDFLSADEGSSFLLNSSKLNKPVFLRKTTKLSAAEKGTL
LHTVMQHIDLRRVSNYEEIYEQVNDLVNREFITKEESNSIDISKILSFFSSNLGKRMIKS
KKVSREVPFIVSLDSTEIYKDLPRDVYEDEKVLLQGIIDCYFEEDDELVLLDYKTDYVDD
LDKIKERYSIQIECYKNALKRLTGKSIKNKYLYLFFNDKILEL
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaagtggacacaagaacaaagagaagcaatttttacaaaaaattgtaatctt
ctagtagctgcaggagcaggagcgggaaaaacagcagtacttgtagagagaataatacaa
aaaataacggatgatgaagatgatgtagatatagataaacttttagttgttacttttact
aatgcagctgcttctgaaatgagggaaagaattggagatgctatctcaaaaaaattagaa
gttgcacctgagtcaaaaaatcttcaaaagcagcttatgttgttgaacaaagcaaatata
atgactatacattctttttgtcttcaagtcattaagaataattttcatgtcatagattta
gatcctaattttagagtttgtgatgaaactgaatccatacttttgaaacaggaaaccatt
gatgaaatctttgatgataaatatgagcaaagtgatgaagggtttatgcagcttgtaaag
tgctatggaggaaaaaatgactttaaagttgaaaatatgatattggatttatatgaattt
gctaaaagtaatccatggcctgaaaaatggatttcaacaatggtagaacaatttaatgtt
gaagagagttttaattttgaaaaatcttcttggttccctgtaattttagactatatgata
gttgaattacaaggttgcaaaagtaaaatagaaaaagcaatagaaatagtagaaaatgct
caaggtatagactattatttagaacctatgaaaaaagatttagaaaatataaataatata
gttcaatgtaggaatttagaagagttaaaatatcaatttgataatttacagtttgaaaaa
cttcctgtgaaaagaaataaggatgctgataaagaagcaaaagaaaagtcaaagaaaata
agagatgaggtaaagaaaaaaattactgaaatatcagaagatatttttttgaaaatgagt
agtatgagtaaggacttaaaagaaatgtatcctaaaatgaagtctttagggaaaatagta
atggagtttaatgaaatctatggagctaaaaaaagagaaagaggattagttgattttaat
gatattgagcatttttgtcttaatatacttatagatacagaagataatgtagatataacg
ccttcgaaaatagcattggagtataaacaaaagtttgatgaaatacttatagatgagtat
caagatagtaatgaagtacaagaagtaattatgaatgctatttctagaaaaaatgaaata
ccaaacatatttatggttggagatgtaaaacaaagcatatataggtttaggcaagctaag
ccggaattgtttttagataaatataatagatattcagataatagagagggaaatgagagg
aaaataaaactttttaaaaattttagaagcagacctgaaataatttttgcagttaattat
gtatttaatcagataatgtcagtgaatataggtgaacttgaatatgatgaaggagaaatg
ctaaaaagtggagctgatttcccagaattagaaggaaatgtagtggatactgaaagtaaa
atagaacttcatttattagataaaaaagataatgatgtatatgaagaaaatagccaaaat
ccagaaggtactgcagttgaaaatattaatgaggaaactccagataatatacagatagaa
gcaagattagtaggaaaaagaataatagatttaataaataatgagaaatttaaggtgtat
gataaggacgagaaaaagtatagaaatgttacttataaagatatagtaatattattgagg
actacatcaaattgggcacctacttttgtagaagaacttaagaattttgctatacctgta
tttgcggataccaatacgggatattttgataatatagaaataagaactatgatttctctc
tttcaaataattgataatcctattcaagatataccgttactatcaatacttaggtcaccg
atagagggattttcgtcagaagaaattatagatataagaatggtagacagaaatataaat
ttctttagtatattaaaaataatagtagaaaatgatgatacagatgaaaggactagacat
ataagtaaggaacttagggataaggtaagcaattttctcaacaaacttagaaaatggaga
aaaaaatctttatatatgcctattgatgaatttatatggtacatttacactgatacagga
tactatggttttgttggagctatgtctggaggaaaacaaaggcaagctaacttaagaatt
ttattccaaagagcaaaacaatatgaaagcacaagttataaaggattatttaactttata
aatttcataaacaagctaagaaacagcagtggagatatgggaagtgctaaaattattgga
gaaaatgaagatgttgtaaggattatgagtgtgcataaaagtaaggggttagaatttcct
gtagttatactttcaggaacaggtaaaaattttaatttaatggatatgaacagaagtgta
ctatttcatagtgaattagggttaggcccagaatatgtaaatatagatagaaggattagt
tatccaactattgctaaacaggttcttaaaaagaaaataaaagttgaaaccttatctgaa
gagatgagaatattatatgtagcacttacaagagcaaaagaaaaacttataataacaggt
actgctaaggatttagaaaaaacttcagaaaaatggtgtgaagctataagatatgaggaa
ggaaaaatacctgaatatgtagtgataaatgctaaaaactatttagattggatagtacca
gctgtagctaaacatccatctggaaaggttataagagatataggaggtgtacatgatttc
aaaacttcaatagatgataagcataagtggcatattgaattttggaaaaaggaagattta
aaaagtgacttatgtgatgaagacgagaaagaaaatataattaaaatagtaaaaaatgaa
gctttgaatgataaaaatagcgtatattatgatgaagttaatagaaggctcaattgggag
tataaatataaagagtcatgcaatataccatcaaaattttctgtatcagagataaagaga
agatttgactttttatcagcagatgaaggaagttcatttttacttaattctagtaagtta
aataaacctgtatttcttcggaaaacaacaaagttatcagcagcagagaaggggacactg
ttgcatactgttatgcagcatatagatttgaggagagtttctaactatgaagagatatat
gaacaggtaaatgacttagtaaatagggaatttataactaaagaagaatccaattcaatt
gacataagtaaaatattaagtttttttagttctaatttaggaaaaagaatgataaaatca
aaaaaagtttcaagagaagttccttttattgtaagtttggatagcactgagatttacaaa
gatttgccgagggatgtatatgaagatgaaaaagtacttttgcagggaataatagattgc
tattttgaagaagatgatgaattagtacttttagattataaaacagattatgtagatgat
ttagataagatcaaagaaagatattcgattcaaattgagtgttataaaaatgcgcttaaa
aggttaacaggaaaaagtataaaaaataaatatttatatttattttttaatgataagata
ttggaactttaa
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