Clostridium scatologenes: CSCA_3598
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Entry
CSCA_3598 CDS
T03803
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_3598
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSCA_3598
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CSCA_3598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
L27_1
Motif
Other DBs
NCBI-ProteinID:
AKA70723
UniProt:
A0A0E3JQ48
LinkDB
All DBs
Position
complement(3852350..3855796)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSLRFIYGRAGSGKSHFCLNDIKKKINEGADNPLILLVPEQFSFQAEKNLIKIIGEAGML
KAQVLSFRRMAYKVLNEVGGLTRKHINASGKSMLIYKIMEENSSKLKVFKKSVKRQGFIT
TVSDIITEFKRYDITLENLNSTLDRIENENLRNKMEDLILIFSQFEERLHKKYVDSEDDL
TILAEKMSKSHMFDEAEIWIDEFSSFTPQEYKVLDRLMDKTKRINITLCTDYLDCSLVDN
STDVFLPTKSTEEKILKIVLEKNIKYDKPIALKCSPCYRFKDTKELQHLEKYLFSYPYKV
YKEKCEDISIFKALNKYTEVEDTARDIVRMCRDSGFRFKDIAVISGDLDGYESLFSAIFK
EYDIPYFIDKKRKINDNPIIMLIMSVVEILSQNWSYESVFRYLKTGLLELNKEDIDLVEN
YVLSSGIKGSAWVKEEPWDFGLSYSFEKKETSDYEKETLNNINLIRDKIREPIIKLYQDI
KGRKKGRDICEGIYNFLCNIKLDEKVAAWIEYFKENEELDKANEYSQIWNIVMEVLDQIV
EVMGEETLSVGTFSQVLSKGFDEYEIGVIPPALDQVLIGSVTRLKSHDVSVLYIVGVNDG
VFPAALAQEGVLTDSDRELLKERGIEIAKDTRSRAFEEQFLVYTTLTTVSKYLRLSYSIA
DEVGKTKRPSIVIGRIKKIFSNVEEEGNLIEISDDEEKLKYVTGPRSTFNKLISNIKKDS
NGYITPMWLDVYRWYNKNDKWNRKLENVFNGFSYSNEAEIMDTNRVRKLYGRHLNISVSR
LERFVNCPFSYFIQYGLNAKERKVYKLSSPDLGSFMHNVLQVFSSKLKEEKLSWKEIDSE
WCEKEVSEIVDEILESMPSSVFNSSKRYKHITNNAKRILNRSVWLIAEHMKRGGFEPSGY
ELSFGNSGDFPPISLQLHSGETISLIGRVDRVDSMSSEENTYLRIVDYKSGTKEFKLSDV
YYGLQMQLLIYLDAMLTELEKEMNKEAIPGGILYFKLDDPIVKTKGDITDSEIEERIMKA
LKMNGLLLDDPDIIRGMDNEIEKNSDIIPASIKKDGTLSKAYSSVATIEQFNLLRKYVRD
TIASLCEQILEGNICVKPSKHKNGNACEYCIYPSICQFDTSLEENKYKIINDKSDETVWN
EIKNKYKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgagatttatatatggaagagcaggcagcggtaaaagtcatttttgcttaaat
gatattaaaaagaagataaatgaaggagcagataatcctttaattcttttagttcctgaa
cagttctcatttcaagcagaaaaaaatcttataaaaattattggagaagctggaatgctt
aaagcacaagttttaagttttagaaggatggcgtataaagtattaaacgaagtaggtgga
cttacaagaaagcatattaatgcttcaggaaagagtatgcttatttataagataatggag
gaaaatagtagtaagcttaaggtttttaaaaagtcagtaaaaaggcaagggtttatcact
acggtttctgatattataacagaatttaagagatatgatattaccctggaaaatttgaat
agtactttagatagaatagaaaatgaaaatttaagaaataaaatggaagatttaatatta
atcttttcacaatttgaagaaaggcttcataaaaaatatgttgattcagaagatgattta
actattttggcagaaaagatgtcaaaatcacatatgtttgatgaggcagaaatatggata
gatgaattttcaagtttcactcctcaagaatataaagttttagatagacttatggataag
accaaaagaattaacataactttatgtacagattatttagactgcagcttagttgataat
agtacagatgtatttttaccaactaaaagtacagaagaaaaaattttgaaaattgtttta
gaaaaaaatataaaatatgataaaccaattgcattaaaatgtagtccttgttatagattt
aaagacactaaagaacttcaacatttagaaaaatacttattttcttatccatataaggtt
tataaagaaaaatgtgaagacataagtatttttaaagcattaaataaatatacagaagta
gaagatactgctagggatatagttagaatgtgtagagatagcggatttaggtttaaagat
attgcagtaataagtggagatcttgatggatatgaaagtctgtttagtgcaatttttaaa
gaatatgatataccttatttcatagataaaaaaagaaaaataaatgataatcctattata
atgctaataatgtctgtagtagagatattatcacaaaattggagttatgaatctgtattt
aggtatttaaaaacaggacttttggagttaaataaggaggatatagatttagtagaaaat
tatgtgcttagcagtggtataaaaggaagtgcttgggttaaagaagaaccttgggatttt
ggtttaagctatagttttgaaaaaaaagaaacatcagattatgaaaaggaaactctgaat
aatataaatttaattagagataaaataagagagcctattattaaactatatcaagatata
aaaggaagaaaaaaaggaagagatatatgtgaaggaatttataattttttatgtaatata
aaattagatgaaaaggtagctgcatggatagaatattttaaggaaaatgaagaattagat
aaagctaatgagtatagtcagatatggaatatagtaatggaggttttagatcaaatagta
gaagtaatgggggaagaaacgttatctgttggaaccttttcacaggttttatccaaaggt
tttgatgaatatgaaataggggtaattccaccagctttagatcaagttttaattggcagt
gttacgagacttaaaagtcatgatgtatctgtattatatattgttggagttaatgacgga
gtttttccagctgcactagcgcaagaaggagtattaacagatagcgatagagaactttta
aaggaaagaggaatagaaattgcaaaggatactagaagtagagcttttgaagaacaattt
ttagtgtatactaccttaacaactgtaagtaaatatttaagactaagctattctatagca
gatgaagttggaaaaacaaaacgaccttctatagtgataggtagaattaaaaagatattt
agcaatgtagaggaagaaggtaatttaatagagatatcagatgatgaggaaaaattaaag
tatgtaacaggaccaagatcaacctttaataagcttatatcaaatattaagaaagattct
aatggatatataacacctatgtggttagatgtgtatagatggtacaataaaaatgataaa
tggaatagaaaacttgaaaatgtatttaatggtttttcatatagtaatgaagcagaaatc
atggatacaaatagagtaagaaaactttatggaaggcatttaaatataagtgtgtctaga
cttgaaaggtttgtaaattgtccattttcttattttatacaatatggacttaatgcaaag
gaaagaaaagtatataaattaagttcaccagatttgggaagctttatgcataatgtactt
caagtattttcaagtaaacttaaggaagaaaagttaagttggaaggaaattgatagtgaa
tggtgtgagaaagaagtttctgaaatagtggatgaaattttagaaagtatgcctagttct
gtatttaatagttctaaaagatataagcatataactaataatgcaaaaagaattcttaat
agatcagtgtggcttatagctgagcatatgaaaaggggaggctttgaaccttctgggtat
gaactatcatttggtaattcaggagattttccacctatttccctacagcttcattctggt
gaaactataagtcttataggaagagttgacagagtagatagtatgagtagtgaggagaat
acttatttaagaatagtagattataaatctggaacaaaggaatttaagctttcagatgta
tattatggtttacaaatgcagcttttaatatatttagatgctatgctcacggaacttgaa
aaagaaatgaataaagaggctattccgggaggaattctttattttaaattagatgatcca
atagtaaagacaaaaggagatattactgattcagaaatagaagagagaataatgaaagcc
ttaaaaatgaatggattattattagatgaccctgatattataagaggaatggataatgaa
atagaaaaaaattctgatataataccagcttctataaagaaggatggtactttgtctaaa
gcgtattcttcagttgccacaatagagcaatttaatcttttaagaaaatatgtaagggat
actatagcttctttgtgtgagcaaatattggaaggtaatatatgtgtgaagcctagtaaa
cataagaatggaaatgcttgtgaatactgtatttatccatctatatgtcaatttgataca
tctttagaagaaaacaagtataagataataaatgataagagtgatgaaactgtttggaat
gaaataaaaaataagtataaaaaataa
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