Clostridium scatologenes: CSCA_4011
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Entry
CSCA_4011 CDS
T03803
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csq
Clostridium scatologenes
Pathway
csq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSCA_4011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_4011
Enzymes [BR:
csq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CSCA_4011
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSCA_4011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AKA71136
UniProt:
A0A0E3GRY6
LinkDB
All DBs
Position
complement(4332935..4333507)
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AA seq
190 aa
AA seq
DB search
MLKWRELYEECLQCNKCNLGNKRTNMVFGDGNCRGKIVFVGEAPGADEDRIGLPFVGRAG
QLLTKGLTALNLIRENDYYICNVCKCRPDNNRVPYEDEAVACLPYLRNQVALIKPKIIVC
LGATAMKYILGNDFRITRDRGKWIERKGCYIMATFHPAALFRDENKKVLLWEDLKSVKKK
YDEIKDDKII
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaatggcgagaattatatgaagaatgtttacaatgtaataaatgtaatctggga
aataaaagaactaatatggtgtttggggatggaaattgtagaggaaaaatagtttttgta
ggagaagctccaggagctgacgaggatagaattgggttaccttttgttggtagagcaggg
caacttttaactaaaggacttacagcattgaatttaataagagaaaatgattattacata
tgtaatgtatgcaaatgcagaccagataataatagagtgccatatgaagatgaggctgta
gcatgtttgccatatttaagaaatcaagtagctttaattaaacccaaaattatagtttgc
ctaggagcaactgctatgaagtatattttaggaaacgattttaggataacaagagataga
ggaaagtggattgaaagaaaaggatgctatattatggctacttttcatccagcagcttta
tttagagatgagaataaaaaagtattgctttgggaagacttaaaatctgtaaagaaaaaa
tatgatgaaattaaagatgataaaattatttaa
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