Clostridium scatologenes: CSCA_4233
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Entry
CSCA_4233 CDS
T03803
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
csq
Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csq03032
]
CSCA_4233
03036 Chromosome and associated proteins [BR:
csq03036
]
CSCA_4233
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_4233
DNA replication proteins [BR:
csq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CSCA_4233
Chromosome and associated proteins [BR:
csq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CSCA_4233
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CSCA_4233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
AARP2CN
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
AKA71358
UniProt:
A0A0E3K348
LinkDB
All DBs
Position
4567180..4567455
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELIASIAEKSKLTKKDVEVVLKGFIESVEETLEKGDKVQLVGFGTFETRKRAARVG
RNPRTKEEIEIPESTVPVFKAGKEFKDKVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaatcagaattaattgcaagtatagcagaaaaatcaaaactaacaaagaaggat
gtagaagtagttttaaagggttttatagaaagtgttgaagaaacacttgagaaaggtgat
aaagttcaactagttggatttggaacatttgaaacaagaaagagagctgcaagagtaggc
agaaatccaagaactaaagaagaaatagaaataccagaatcaacagttccagtatttaaa
gctggtaaagaatttaaagataaagtaaacaaataa
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