Clostridium scatologenes: CSCA_4315
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Entry
CSCA_4315 CDS
T03803
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csq
Clostridium scatologenes
Pathway
csq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSCA_4315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csq03021
]
CSCA_4315
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_4315
Enzymes [BR:
csq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSCA_4315
Transcription machinery [BR:
csq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSCA_4315
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSCA_4315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
PASTA
Motif
Other DBs
NCBI-ProteinID:
AKA71440
UniProt:
A0A0E3M847
LinkDB
All DBs
Position
4648649..4649596
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVEVNEDGSYGKFVVEPLERGYGITLGNALRRILLSSLPGVAANHIKIDG
VLHEFSTVRGVKEDVAELVLNIKCLALKMNGDGPKTIYIDAQGPGEVVAGDIKTDGDIEI
INKDLHIATLDDDGKLYMEIQVNTGRGYVSQTKNKSEDMPIGTIAVDSIYTPIKRVNFVV
ENTRVGQITDYDKLSLEVWTNGTIMPEEAISLSAKILIEHFKLFMTLTDHANNVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTERTMDDMMKVRNLGKKSLEEVE
QKLEALGLSLKQSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagagatagaaaagcctaaaatagaatgtgttgaagttaatgaagatggttcctat
ggtaaatttgtagtagaaccattagaaagaggttatggtatcactcttggtaatgcatta
agaagaattcttctttcttctttgccaggagttgctgctaaccatataaaaatagatggt
gtacttcacgaattttcaactgttcgtggagtaaaagaagatgttgctgaattagtatta
aacataaaatgtctagctttaaagatgaatggtgatggtcctaagactatatatatagat
gctcaaggaccaggagaagttgttgcaggagacataaaaaccgatggtgatatagaaata
attaataaggatttgcatatagcaactcttgatgatgatggcaagttatatatggaaatt
caagttaatacaggtagaggatatgtttctcaaacaaagaataaatctgaagatatgcct
ataggaactattgctgtagattcaatttatactcctattaaaagagttaactttgtggta
gaaaatacaagagttggtcaaattactgactatgataagttatctctagaagtatggact
aatggtactataatgccagaagaagctataagcttatcagctaaaattcttatagagcac
tttaagttattcatgacgttaactgatcatgcaaacaacgttgaaataatggttgaaaaa
gaagaagataagaaagaaaaagttcttgaaatgactatagaagagctagatctttcagtt
agaagttataattgtttaaagagagcaggaataaatactgttcaagagctaacagaaaga
acaatggatgatatgatgaaggttagaaacttaggtaagaaatctttagaagaagtagag
caaaagcttgaagctttaggattgtctttaaaacaaagtgaagaataa
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