Clostridium scatologenes: CSCA_4417
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Entry
CSCA_4417 CDS
T03803
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csq
Clostridium scatologenes
Pathway
csq03030
DNA replication
csq03430
Mismatch repair
csq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSCA_4417
03430 Mismatch repair
CSCA_4417
03440 Homologous recombination
CSCA_4417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csq03032
]
CSCA_4417
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_4417
Enzymes [BR:
csq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSCA_4417
DNA replication proteins [BR:
csq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSCA_4417
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSCA_4417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
MotCF
Motif
Other DBs
NCBI-ProteinID:
AKA71542
UniProt:
A0A0E3JR89
LinkDB
All DBs
Position
4764851..4768396
Genome browser
AA seq
1181 aa
AA seq
DB search
MQENTYEWVSLHQHTGYSLLDSSAKIPELISRAKELGMKSIAITDHGVMYGCVDFYKEAK
EQGIKPIIGCEVYVAGKSMHIKQNDKENENYHLVLLVKNETGYRNLMKIVSKASVEGFYY
KPRTDHDYLKTHSEGLISLSACLGGEIQSYILKGNLSKAKEIALLYKDIFKDGFYLELQY
HGMEEQEKVNEELIKMSKELDIPLVATNDVHYIKKEDYKAHDVLLCIQTGKVVDEEDRMR
YPSDEFYLKSPEEMYKIFSRVPEALENTVKIAEQCNFDYEFHKSKLPKFPLPDDVEPYEY
LKDLCYKGLIQRYKVFEKFIEIPFNIENVNELVNSNDEAKKLVERLEYELSIIKQMGYVD
YFLIVWDFINFSVKNGIMTGPGRGSAAGSIIAYTLGITKIDPIKYSLLFERFLNPERVSM
PDIDSDFCYERRGEVIDYVVRKYGENSVSQIITFGTMAARACIRDVGRAMNYPYAEVDRI
AKMIPTVLNITIDKALELNSELKEAYESEERTKALIDIAKALEGLPRHTSTHAAGVVIAS
QPLVNYVPMQKNEDNIVTQFTMGTLEELGLLKMDFLGLRTLTVLRDAVNMVKDNKGISVD
LDKIDYDDKRVYSMIGEGKTVGVFQLESAGMTSFMKELRPDSLEDIIAGISLYRPGPMAE
IPKYISNKNDPEGIEYLTPELESILGVTYGCMVYQEQVMEIVRKLAGYSMGRSDLVRRAM
SKKKHHVMEEERHNFIYGIVDEEGIEKVSGCIKNGISENAADKIFDSMMDFASYAFNKSH
AACYAIVAFQTAYMIHYYPTEYIAAMLNSVKGDNEKVAYYTRFADEIGIQVLTPNINESY
AKFTVKDDKIRFGLSAIKNVGENVIDSIVKSRESKGVFLNLVDFCNKIDASCINKRVVES
LIKAGGFDCFKVYRSKLLAVYEKVLDGVSNSRKKNIDGQMSLFTDFKKIEVNIEYPEIKE
FEKRHILAMEKEMTGLYLSGHPLEEYEKSLSLQTSAKISDIIGDEALEDGTVGQQSKLKD
RDKVIVGGIINSVTKKVTRNNDMMAFIKLEDLYGVIEIIIFPKVFQKYRSLIDEDGIVIV
KGRVSVREDEQPKILCESLEPVIKENTEKLYIQIEDESSLKNALHETKSLFLDFKGNVPV
YFCTKKERKKFRLDKELWINSDIELLSNLKKMFGDKNVKVI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagagaatacatatgagtgggtaagtttgcatcagcatacaggatattctctatta
gattcttcagctaaaattccagaacttatcagtagagctaaagagcttggaatgaagagt
atagctataacagatcatggagtaatgtatgggtgtgttgatttttataaagaagctaaa
gaacaagggataaaacctataataggctgtgaagtgtatgttgcaggaaagtctatgcac
ataaaacagaatgataaagaaaatgaaaattatcatcttgtgctgcttgtaaaaaatgaa
acaggatatagaaatcttatgaaaatagtttctaaggcttctgtagaaggattttattat
aagcctagaacagatcatgattatttaaagactcatagtgaaggattgatatcactaagt
gcttgcttaggaggagaaattcaatcttatattttaaagggaaatttgagcaaagcaaag
gaaatagctcttttatataaagatatatttaaagatggtttttatcttgaacttcaatat
cacggcatggaagaacaggaaaaggtcaatgaagaactaataaaaatgtccaaagaattg
gatatacccttggttgctacaaacgatgtacattatataaaaaaagaagattataaagct
catgatgttttgttgtgcattcagacaggaaaagttgtagatgaagaagatagaatgaga
tatccctcagatgaattttatttaaagtcaccagaagaaatgtacaagatattttctaga
gtgcctgaagctttagaaaatacagtaaaaatagctgagcagtgtaattttgattatgaa
tttcataaatctaaacttcctaaattcccattgccagatgatgtggagccttatgaatat
ttaaaggatttatgttacaaagggttgatacaaaggtataaagtatttgaaaaattcata
gaaattccatttaacatagaaaatgtaaatgaattagtaaatagtaatgatgaagctaaa
aaacttgtagaaagactagaatatgaactttctatcataaagcagatgggatatgtagat
tattttctaatagtatgggattttattaatttttctgtgaaaaatgggataatgacaggt
ccaggaagaggatcagcagcaggatctataattgcatatacattgggaataactaaaata
gatccaattaaatatagcttattgtttgaaaggtttttaaatcctgaacgtgtatctatg
ccagatatagattcagatttttgttatgagagacgtggagaggtaatagactatgttgta
agaaaatatggagagaatagtgtatctcaaattataacctttggaactatggctgctaga
gcatgtataagagatgtgggaagagctatgaattacccttatgctgaagtggatagaata
gctaaaatgatacctacagtactaaacataactattgataaggcactagagttaaattct
gaattgaaggaagcatatgaaagtgaagagagaacaaaggcattaatagatatagctaaa
gctttggaaggacttccaagacatacgtctactcatgcagcaggtgtagttatagcgtct
cagcctttagttaattatgttcctatgcaaaaaaatgaagataatatagtaactcaattt
accatgggaacactagaagagttgggacttctaaagatggactttttaggattaagaact
ctaacagtgcttagagatgcagtaaacatggttaaggacaataaagggataagtgtagac
ttagataaaatagattatgatgataagcgtgtatacagtatgataggagaaggcaaaact
gtaggcgtatttcagttggaatctgcaggaatgacatctttcatgaaagaattaaggccg
gattctttggaggatatcatagcaggaatcagtctttacagaccaggtcctatggcagaa
atacctaaatatattagtaataaaaatgatcctgagggtattgagtatttaacacctgaa
ttagaatccatattgggtgtaacctatggatgtatggtatatcaagagcaggttatggag
atagttagaaagcttgctggatattctatgggtagaagtgatttagtaagacgtgctatg
tctaagaaaaaacatcatgtaatggaagaggaaagacataatttcatatatggaatagta
gatgaagaaggaatagaaaaggtttcaggatgtataaagaatggaatatctgaaaatgca
gctgataagatatttgattctatgatggattttgcaagttatgcatttaataaaagtcat
gctgcttgttatgcgatagtggcatttcaaacagcttatatgatacattattatccaact
gaatatattgccgccatgttaaatagtgtaaaaggtgataatgaaaaggttgcatattat
actagattcgcggatgaaattggaattcaagttttaactccaaatataaatgaaagttat
gctaagtttacagttaaggatgataaaataagatttggactttcggctattaaaaatgta
ggtgaaaatgtaatagatagtatagtaaaatcaagggaaagtaaaggggtatttttaaac
ttagttgatttttgtaataaaatagatgcttcatgcataaacaaaagagtagtggaaagc
cttataaaagcaggaggatttgattgttttaaggtatatagatcaaaattacttgcagtt
tatgaaaaggtattggatggagtaagtaattctagaaaaaaaaatatagatggacaaatg
agtctttttacagattttaaaaagatagaagttaatatagaatatcctgaaataaaggaa
tttgaaaaaagacacattttagccatggaaaaagaaatgacaggactttatttatcagga
catcctttagaagaatatgaaaaaagcttatcattacaaaccagtgctaaaatatcagac
ataataggtgatgaagctttagaagatggaacagttggacagcagtctaaattaaaagat
agagataaagtaattgtaggtggcattataaattcagtaacaaaaaaagtgactagaaac
aatgatatgatggcttttataaaattagaggatttgtatggagtaatagaaattataata
tttccaaaggtatttcaaaaatatagaagtttaatagatgaagatggtatagtaatagta
aagggaagagtgagtgtaagagaagatgaacagcctaaaatattatgtgaaagcttagaa
cctgtaataaaggaaaatactgaaaaattatatatacaaatagaagatgaaagtagcttg
aaaaatgcgcttcatgaaactaaatctttatttttagattttaaaggaaatgtacctgta
tatttttgtactaaaaaagaaagaaaaaaatttagattggataaagagctatggataaat
agtgacatagaacttttatctaatcttaagaaaatgtttggagataaaaatgttaaagta
atttaa
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