Clostridium scatologenes: CSCA_4472
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Entry
CSCA_4472 CDS
T03803
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csq
Clostridium scatologenes
Pathway
csq03420
Nucleotide excision repair
csq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSCA_4472
03430 Mismatch repair
CSCA_4472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csq03400
]
CSCA_4472
Enzymes [BR:
csq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSCA_4472
DNA repair and recombination proteins [BR:
csq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSCA_4472
MMR (mismatch excision repair)
Other MMR factors
CSCA_4472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
MnmE_helical
SLFN-g3_helicase
DEAD
AAA_30
DRE2_N
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKA71597
UniProt:
A0A0E3M893
LinkDB
All DBs
Position
4829743..4831875
Genome browser
AA seq
710 aa
AA seq
DB search
MENNELEKELKREIELNLEKEKLEETLEEIKNQTLNFIQKRKDISDYIVRFRKKKLEEYK
DDEDEIVKYFDHEIFVKEEAFKFIDRKLRELNILSSSPYFGKIIFEDEYGTETVYIGRFG
MDKDEDYEPIIVDWRSPVSALFYAGTLGEATYKAPMGEIKTNILSKRQFIIKKAKLIGLF
DSNIDVKDEVLQMVLSKNAGEKLKDIVMTIQKEQDEIIRQSRKGAVIVDGVAGSGKTTIA
LHRVAYLLYNYRSALEDKVLILGPNSIFMDYISTVLPSLGEVGVKQFTFKEFAMELLDLN
YIMDFKEYMERILQEDKSFIEDVKYKGSVKYIEELDNLIKKLDYQYFKIKEVKFYDKAIA
TKEEIEEMFSVYFKDMPLFRRNKKIKRILISKIKDERNDLVRKVEKEYKESIEKLSKDEL
EIQQNNLNFIRKSKIRDIIRHVIEIKNEMKWINASDVIEIYKEFNNDEQFIYDDLAAILY
LKIRLEGLKYKKEVKHIVIDEAQDYSMLQFEVLKHLTGCKSFTIVGDSNQRIVPFEGEIA
MLQLSKVFSDFDIYNFNLNKSYRSTREIMSFANKYLKSNKTIPLVRNGEKVLEKQVNNLD
DLVDKVVENVVKLKEKEYESIAVVCKDSDTVETLGRLIKEKIYISILNEENMIYSGGEVI
LPSYFAKGLEFDAVILIDDEKFNNKEDKLKYVMATRALHELYVYRTSSIK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaatgaacttgaaaaagaattaaaaagggaaatagaattaaatttagaaaaa
gaaaagttagaagagactcttgaagaaataaaaaatcagactttaaattttatacaaaag
agaaaagatatttcagattatatagttagatttagaaaaaagaaacttgaagaatataaa
gatgatgaagatgaaatagtaaagtattttgatcatgaaatatttgtaaaagaagaggcg
tttaagtttatagatagaaaactcagagagcttaatattcttagtagttctccttatttt
ggaaagataatttttgaagatgaatatggaacggaaactgtatatattggaagatttggt
atggataaagatgaagattatgaaccaattattgtggattggaggtctcctgtaagtgct
ttgttttatgcaggaactttaggagaagcaacttataaagcaccaatgggtgaaataaag
acaaatattttatctaagagacaatttatcataaaaaaagctaagttaataggattattt
gattccaatattgatgttaaagatgaagtacttcaaatggtattaagcaaaaatgctggt
gaaaagttaaaagacatagtaatgactatacagaaggaacaagatgaaataataagacag
tctagaaaaggtgctgtaatagttgatggagtagctggtagtggtaaaactactatagca
cttcatagagttgcatatcttttatataattatagaagtgcattagaagataaagttttg
atacttggtcctaatagcatatttatggactatatttctacagttttgccaagtttgggt
gaggttggagtaaaacagtttacctttaaagaatttgcaatggaacttttagatttgaat
tacataatggattttaaagaatatatggaaagaatattgcaagaagataaaagttttatt
gaagatgtaaaatataaaggatctgtaaaatacattgaagagcttgataacttgattaaa
aagttagattatcaatattttaaaataaaggaagttaaattttatgacaaggctatagca
actaaagaagaaattgaagaaatgtttagtgtctattttaaagatatgcctctatttaga
agaaacaaaaaaataaaaagaatattgatatctaaaattaaggatgaaagaaacgattta
gttagaaaagtagaaaaagaatataaggaatcaattgaaaaattatctaaagatgaattg
gaaattcagcagaataacttaaactttataagaaaaagtaaaataagagacattataaga
catgtaatagaaataaaaaatgaaatgaagtggataaacgcttcagatgttattgaaatc
tataaggaatttaacaatgatgaacaatttatttatgatgatttagcagctatattgtat
ttgaaaatcaggcttgagggcttaaaatataaaaaggaagtaaagcatattgttatagat
gaggcacaggattattcaatgcttcaatttgaagtgttaaagcatcttacaggatgtaaa
tcatttactatagttggtgatagcaatcaaagaatagttccttttgaaggggagattgct
atgcttcaattgagcaaagtatttagtgattttgatatttataatttcaatttaaataaa
agctataggtcaacaagagaaattatgagttttgcaaataaatatttaaaaagtaataaa
actattcctttagtgagaaatggtgagaaagttctggaaaaacaggtaaataacctagat
gatttagtagacaaagtagtagaaaatgttgtaaaattaaaggagaaagaatatgaaagt
atagcagttgtttgcaaagattcagatacagtagaaactttgggtagacttataaaagaa
aaaatttatatttccatattaaatgaagaaaatatgatttattctggaggagaagtaata
ctgccatcttattttgccaaaggtttagaatttgatgctgttatattaattgatgatgaa
aaatttaataataaagaggacaaattaaaatatgtaatggcaacaagagccttgcatgaa
ttatatgtatatagaacttcctcgataaaataa
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